2i57: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,331,613 edits
No edit summary
 
(10 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:2i57.png|left|200px]]


<!--
==Crystal Structure of L-Rhamnose Isomerase from Pseudomonas stutzeri in Complex with D-Allose==
The line below this paragraph, containing "STRUCTURE_2i57", creates the "Structure Box" on the page.
<StructureSection load='2i57' size='340' side='right'caption='[[2i57]], [[Resolution|resolution]] 1.97&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2i57]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_stutzeri Pseudomonas stutzeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I57 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I57 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.97&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AOS:D-ALLOSE'>AOS</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_2i57| PDB=2i57 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i57 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i57 OCA], [https://pdbe.org/2i57 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i57 RCSB], [https://www.ebi.ac.uk/pdbsum/2i57 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i57 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q75WH8_STUST Q75WH8_STUST]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/2i57_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i57 ConSurf].
<div style="clear:both"></div>


===Crystal Structure of L-Rhamnose Isomerase from Pseudomonas stutzeri in Complex with D-Allose===
==See Also==
 
*[[L-rhamnose isomerase|L-rhamnose isomerase]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_17141803}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 17141803 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_17141803}}
 
==About this Structure==
2I57 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_stutzeri Pseudomonas stutzeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I57 OCA].
 
==Reference==
The structures of L-rhamnose isomerase from Pseudomonas stutzeri in complexes with L-rhamnose and D-allose provide insights into broad substrate specificity., Yoshida H, Yamada M, Ohyama Y, Takada G, Izumori K, Kamitori S, J Mol Biol. 2007 Feb 2;365(5):1505-16. Epub 2006 Nov 6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17141803 17141803]
[[Category: L-rhamnose isomerase]]
[[Category: Pseudomonas stutzeri]]
[[Category: Pseudomonas stutzeri]]
[[Category: Single protein]]
[[Category: Izumori K]]
[[Category: Izumori, K.]]
[[Category: Kamitori S]]
[[Category: Kamitori, S.]]
[[Category: Takada G]]
[[Category: Takada, G.]]
[[Category: Yamada M]]
[[Category: Yamada, M.]]
[[Category: Yoshida H]]
[[Category: Yoshida, H.]]
[[Category: Beta/alpha barrel]]
[[Category: Homo-tetramer]]
[[Category: Metal-binding protein]]
[[Category: Tim barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 09:50:15 2008''
Retrieved from "https://proteopedia.org/2i57"