1xdw: Difference between revisions

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{{Seed}}
[[Image:1xdw.png|left|200px]]


<!--
==NAD+-dependent (R)-2-Hydroxyglutarate Dehydrogenase from Acidaminococcus fermentans==
The line below this paragraph, containing "STRUCTURE_1xdw", creates the "Structure Box" on the page.
<StructureSection load='1xdw' size='340' side='right'caption='[[1xdw]], [[Resolution|resolution]] 1.98&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1xdw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Acidaminococcus_fermentans Acidaminococcus fermentans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XDW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XDW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.98&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xdw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xdw OCA], [https://pdbe.org/1xdw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xdw RCSB], [https://www.ebi.ac.uk/pdbsum/1xdw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xdw ProSAT]</span></td></tr>
{{STRUCTURE_1xdw|  PDB=1xdw  |  SCENE=  }}
</table>
 
== Evolutionary Conservation ==
===NAD+-dependent (R)-2-Hydroxyglutarate Dehydrogenase from Acidaminococcus fermentans===
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
<!--
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xd/1xdw_consurf.spt"</scriptWhenChecked>
The line below this paragraph, {{ABSTRACT_PUBMED_15634349}}, adds the Publication Abstract to the page
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
(as it appears on PubMed at http://www.pubmed.gov), where 15634349 is the PubMed ID number.
    <text>to colour the structure by Evolutionary Conservation</text>
-->
  </jmolCheckbox>
{{ABSTRACT_PUBMED_15634349}}
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xdw ConSurf].
 
<div style="clear:both"></div>
==About this Structure==
__TOC__
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XDW OCA].  
</StructureSection>
 
[[Category: Acidaminococcus fermentans]]
==Reference==
[[Category: Large Structures]]
Structural basis for stereo-specific catalysis in NAD(+)-dependent (R)-2-hydroxyglutarate dehydrogenase from Acidaminococcus fermentans., Martins BM, Macedo-Ribeiro S, Bresser J, Buckel W, Messerschmidt A, FEBS J. 2005 Jan;272(1):269-81. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15634349 15634349]
[[Category: Bresser J]]
[[Category: Bresser, J.]]
[[Category: Buckel W]]
[[Category: Buckel, W.]]
[[Category: Macedo-Ribeiro S]]
[[Category: Macedo-Ribeiro, S.]]
[[Category: Martins BM]]
[[Category: Martins, B M.]]
[[Category: Messerschmidt A]]
[[Category: Messerschmidt, A.]]
[[Category: Structural variant of the bab rossmann fold]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 11:30:35 2008''
Retrieved from "https://proteopedia.org/1xdw"