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{{Seed}}
[[Image:1wrb.png|left|200px]]


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==Crystal structure of the N-terminal RecA-like domain of DjVLGB, a pranarian Vasa-like RNA helicase==
The line below this paragraph, containing "STRUCTURE_1wrb", creates the "Structure Box" on the page.
<StructureSection load='1wrb' size='340' side='right'caption='[[1wrb]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1wrb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Dugesia_japonica Dugesia japonica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WRB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WRB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1wrb|  PDB=1wrb  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wrb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wrb OCA], [https://pdbe.org/1wrb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wrb RCSB], [https://www.ebi.ac.uk/pdbsum/1wrb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wrb ProSAT], [https://www.topsan.org/Proteins/RSGI/1wrb TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the N-terminal RecA-like domain of DjVLGB, a pranarian Vasa-like RNA helicase===
== Function ==
 
[https://www.uniprot.org/uniprot/O97032_DUGJA O97032_DUGJA]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15797730}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 15797730 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wr/1wrb_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15797730}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1WRB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Dugesia_japonica Dugesia japonica]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WRB OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wrb ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of the N-terminal RecA-like domain of a DEAD-box RNA helicase, the Dugesia japonica vasa-like gene B protein., Kurimoto K, Muto Y, Obayashi N, Terada T, Shirouzu M, Yabuki T, Aoki M, Seki E, Matsuda T, Kigawa T, Okumura H, Tanaka A, Shibata N, Kashikawa M, Agata K, Yokoyama S, J Struct Biol. 2005 Apr;150(1):58-68. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15797730 15797730]
</StructureSection>
[[Category: Dugesia japonica]]
[[Category: Dugesia japonica]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Agata, K.]]
[[Category: Agata K]]
[[Category: Aoki, M.]]
[[Category: Aoki M]]
[[Category: Kashikawa, M.]]
[[Category: Kashikawa M]]
[[Category: Kigawa, T.]]
[[Category: Kigawa T]]
[[Category: Kurimoto, K.]]
[[Category: Kurimoto K]]
[[Category: Matsuda, T.]]
[[Category: Matsuda T]]
[[Category: Muto, Y.]]
[[Category: Muto Y]]
[[Category: Obayashi, N.]]
[[Category: Obayashi N]]
[[Category: Okumura, H.]]
[[Category: Okumura H]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Seki E]]
[[Category: Seki, E.]]
[[Category: Shibata N]]
[[Category: Shibata, N.]]
[[Category: Shirouzu M]]
[[Category: Shirouzu, M.]]
[[Category: Tanaka A]]
[[Category: Tanaka, A.]]
[[Category: Terada T]]
[[Category: Terada, T.]]
[[Category: Yabuki T]]
[[Category: Yabuki, T.]]
[[Category: Yokoyama S]]
[[Category: Yokoyama, S.]]
[[Category: Dead box]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rna helicase]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Vasa]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 12:32:17 2008''

Latest revision as of 13:33, 13 March 2024

Crystal structure of the N-terminal RecA-like domain of DjVLGB, a pranarian Vasa-like RNA helicase

1wrb, resolution 2.40Å

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