2hoj: Difference between revisions

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{{Seed}}
[[Image:2hoj.png|left|200px]]


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==Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions==
The line below this paragraph, containing "STRUCTURE_2hoj", creates the "Structure Box" on the page.
<StructureSection load='2hoj' size='340' side='right'caption='[[2hoj]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2hoj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HOJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=A23:ADENOSINE-5-PHOSPHATE-2,3-CYCLIC+PHOSPHATE'>A23</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene>, <scene name='pdbligand=TPP:THIAMINE+DIPHOSPHATE'>TPP</scene></td></tr>
{{STRUCTURE_2hoj|  PDB=2hoj  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hoj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hoj OCA], [https://pdbe.org/2hoj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hoj RCSB], [https://www.ebi.ac.uk/pdbsum/2hoj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hoj ProSAT]</span></td></tr>
</table>


===Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions===
==See Also==
 
*[[Riboswitch 3D structures|Riboswitch 3D structures]]
 
*[[Ribozyme 3D structures|Ribozyme 3D structures]]
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The line below this paragraph, {{ABSTRACT_PUBMED_16962976}}, adds the Publication Abstract to the page
</StructureSection>
(as it appears on PubMed at http://www.pubmed.gov), where 16962976 is the PubMed ID number.
[[Category: Escherichia coli]]
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[[Category: Large Structures]]
{{ABSTRACT_PUBMED_16962976}}
[[Category: Edwards TE]]
 
[[Category: Ferre-D'Amare AR]]
==About this Structure==
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HOJ OCA].
 
==Reference==
Crystal structures of the thi-box riboswitch bound to thiamine pyrophosphate analogs reveal adaptive RNA-small molecule recognition., Edwards TE, Ferre-D'Amare AR, Structure. 2006 Sep;14(9):1459-68. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16962976 16962976]
[[Category: Amare, A R.Ferre-D.]]
[[Category: Edwards, T E.]]
[[Category: Riboswitch]]
[[Category: Rna]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 14:26:38 2008''
Retrieved from "https://proteopedia.org/2hoj"