1oqb: Difference between revisions

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{{Seed}}
[[Image:1oqb.png|left|200px]]


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==The Crystal Structure of the one-iron form of the di-iron center in Stearoyl Acyl Carrier Protein Desaturase from Ricinus Communis (Castor Bean).==
The line below this paragraph, containing "STRUCTURE_1oqb", creates the "Structure Box" on the page.
<StructureSection load='1oqb' size='340' side='right'caption='[[1oqb]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1oqb]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Ricinus_communis Ricinus communis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OQB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1OQB FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr>
{{STRUCTURE_1oqb|  PDB=1oqb  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1oqb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1oqb OCA], [https://pdbe.org/1oqb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1oqb RCSB], [https://www.ebi.ac.uk/pdbsum/1oqb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1oqb ProSAT]</span></td></tr>
 
</table>
===The Crystal Structure of the one-iron form of the di-iron center in Stearoyl Acyl Carrier Protein Desaturase from Ricinus Communis (Castor Bean).===
== Function ==
 
[https://www.uniprot.org/uniprot/STAD_RICCO STAD_RICCO] Converts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons Delta(9) and Delta(10) of the acyl chain.
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_12704186}}, adds the Publication Abstract to the page
Check<jmol>
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  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/oq/1oqb_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_12704186}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1OQB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ricinus_communis Ricinus communis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1OQB OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1oqb ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Azide and acetate complexes plus two iron-depleted crystal structures of the di-iron enzyme delta9 stearoyl-acyl carrier protein desaturase. Implications for oxygen activation and catalytic intermediates., Moche M, Shanklin J, Ghoshal A, Lindqvist Y, J Biol Chem. 2003 Jul 4;278(27):25072-80. Epub 2003 Apr 18. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12704186 12704186]
</StructureSection>
[[Category: Large Structures]]
[[Category: Ricinus communis]]
[[Category: Ricinus communis]]
[[Category: Single protein]]
[[Category: Ghoshal AK]]
[[Category: Ghoshal, A K.]]
[[Category: Lindqvist Y]]
[[Category: Lindqvist, Y.]]
[[Category: Moche M]]
[[Category: Moche, M.]]
[[Category: Shanklin J]]
[[Category: Shanklin, J.]]
[[Category: Di-iron enzyme]]
[[Category: Electron transfer]]
[[Category: Fatty acid biosynthesis]]
[[Category: Four-helix bundle]]
 
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Retrieved from "https://proteopedia.org/1oqb"