1ni5: Difference between revisions

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New page: left|200px<br /><applet load="1ni5" size="450" color="white" frame="true" align="right" spinBox="true" caption="1ni5, resolution 2.65Å" /> '''Structure of the Mes...
 
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[[Image:1ni5.gif|left|200px]]<br /><applet load="1ni5" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1ni5, resolution 2.65&Aring;" />
'''Structure of the MesJ PP-ATPase from Escherichia Coli'''<br />


==About this Structure==
==Structure of the MesJ PP-ATPase from Escherichia Coli==
1NI5 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1NI5 OCA].  
<StructureSection load='1ni5' size='340' side='right'caption='[[1ni5]], [[Resolution|resolution]] 2.65&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1ni5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NI5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NI5 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.65&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ni5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ni5 OCA], [https://pdbe.org/1ni5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ni5 RCSB], [https://www.ebi.ac.uk/pdbsum/1ni5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ni5 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/1ni5 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/TILS_ECOLI TILS_ECOLI] Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. This enzyme is essential for viability.[HAMAP-Rule:MF_01161]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/1ni5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ni5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Burley, S.K.]]
[[Category: Burley SK]]
[[Category: Burling, T.]]
[[Category: Burling T]]
[[Category: Gu, M.]]
[[Category: Gu M]]
[[Category: Lima, C.D.]]
[[Category: Lima CD]]
[[Category: NYSGXRC, New.York.Structural.GenomiX.Research.Consortium.]]
[[Category: atp]]
[[Category: atpase]]
[[Category: new york structural genomix research consortium]]
[[Category: nysgxrc]]
[[Category: pp-type]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: putative cell cycle protein]]
[[Category: structural genomics]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Tue Nov 20 22:16:42 2007''
Retrieved from "https://proteopedia.org/1ni5"