2fzv: Difference between revisions

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[[Image:2fzv.png|left|200px]]


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==Crystal Structure of an apo form of a Flavin-binding Protein from Shigella flexneri==
The line below this paragraph, containing "STRUCTURE_2fzv", creates the "Structure Box" on the page.
<StructureSection load='2fzv' size='340' side='right'caption='[[2fzv]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
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== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2fzv]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_2a_str._2457T Shigella flexneri 2a str. 2457T]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2FZV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_2fzv|  PDB=2fzv  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2fzv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2fzv OCA], [https://pdbe.org/2fzv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2fzv RCSB], [https://www.ebi.ac.uk/pdbsum/2fzv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2fzv ProSAT], [https://www.topsan.org/Proteins/MCSG/2fzv TOPSAN]</span></td></tr>
 
</table>
===Crystal Structure of an apo form of a Flavin-binding Protein from Shigella flexneri===
== Function ==
 
[https://www.uniprot.org/uniprot/ARREH_SHIFL ARREH_SHIFL] Has NADPH-dependent FMN reductase activity and very low azoreductase activity. No activity with NADH.<ref>PMID:17962405</ref>
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fz/2fzv_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_17962405}}
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    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2FZV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Shigella_flexneri_2a Shigella flexneri 2a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2FZV OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2fzv ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
Crystal structure of an apo form of Shigella flexneri ArsH protein with an NADPH-dependent FMN reductase activity., Vorontsov II, Minasov G, Brunzelle JS, Shuvalova L, Kiryukhina O, Collart FR, Anderson WF, Protein Sci. 2007 Nov;16(11):2483-90. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17962405 17962405]
<references/>
[[Category: Shigella flexneri 2a]]
__TOC__
[[Category: Single protein]]
</StructureSection>
[[Category: Anderson, W F.]]
[[Category: Large Structures]]
[[Category: Brunzelle, J S.]]
[[Category: Shigella flexneri 2a str. 2457T]]
[[Category: Collart, F R.]]
[[Category: Anderson WF]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Brunzelle JS]]
[[Category: Minasov, G.]]
[[Category: Collart FR]]
[[Category: Shuvalova, L.]]
[[Category: Joachimiak A]]
[[Category: Vorontsov, I I.]]
[[Category: Minasov G]]
[[Category: Crystal structure]]
[[Category: Shuvalova L]]
[[Category: Flavin binding protein]]
[[Category: Vorontsov II]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
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