1pno: Difference between revisions

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{{Seed}}
[[Image:1pno.png|left|200px]]


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==Crystal structure of R. rubrum transhydrogenase domain III bound to NADP==
The line below this paragraph, containing "STRUCTURE_1pno", creates the "Structure Box" on the page.
<StructureSection load='1pno' size='340' side='right'caption='[[1pno]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1pno]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodospirillum_rubrum Rhodospirillum rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNO OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PNO FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
{{STRUCTURE_1pno|  PDB=1pno |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pno FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pno OCA], [https://pdbe.org/1pno PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pno RCSB], [https://www.ebi.ac.uk/pdbsum/1pno PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pno ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PNTB_RHORT PNTB_RHORT] The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane.[UniProtKB:P07001]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pn/1pno_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pno ConSurf].
<div style="clear:both"></div>


===Crystal structure of R. rubrum transhydrogenase domain III bound to NADP===
==See Also==
 
*[[NAD(P) transhydrogenase 3D structures|NAD(P) transhydrogenase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_14567675}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 14567675 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_14567675}}
 
==About this Structure==
1PNO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Rhodospirillum_rubrum Rhodospirillum rubrum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PNO OCA].
 
==Reference==
Conformational change in the NADP(H) binding domain of transhydrogenase defines four states., Sundaresan V, Yamaguchi M, Chartron J, Stout CD, Biochemistry. 2003 Oct 28;42(42):12143-53. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/14567675 14567675]
[[Category: Rhodospirillum rubrum]]
[[Category: Rhodospirillum rubrum]]
[[Category: Single protein]]
[[Category: Chartron J]]
[[Category: Chartron, J.]]
[[Category: Stout CD]]
[[Category: Stout, C D.]]
[[Category: Sundaresan V]]
[[Category: Sundaresan, V.]]
[[Category: Yamaguchi M]]
[[Category: Yamaguchi, M.]]
[[Category: Nadp]]
[[Category: Nucleotide binding fold]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 19:28:57 2008''
Retrieved from "https://proteopedia.org/1pno"