1wki: Difference between revisions

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{{Seed}}
[[Image:1wki.png|left|200px]]


<!--
==solution structure of ribosomal protein L16 from thermus thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_1wki", creates the "Structure Box" on the page.
<StructureSection load='1wki' size='340' side='right'caption='[[1wki]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1wki]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WKI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WKI FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wki FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wki OCA], [https://pdbe.org/1wki PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wki RCSB], [https://www.ebi.ac.uk/pdbsum/1wki PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wki ProSAT], [https://www.topsan.org/Proteins/RSGI/1wki TOPSAN]</span></td></tr>
{{STRUCTURE_1wki|  PDB=1wki |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/RL16_THET8 RL16_THET8] This protein binds directly to 23S rRNA. Interacts with the A site tRNA.[HAMAP-Rule:MF_01342]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wk/1wki_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wki ConSurf].
<div style="clear:both"></div>


===solution structure of ribosomal protein L16 from thermus thermophilus HB8===
==See Also==
 
*[[Ribosomal protein L16|Ribosomal protein L16]]
 
__TOC__
<!--
</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15561149}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 15561149 is the PubMed ID number.
[[Category: Thermus thermophilus HB8]]
-->
[[Category: Kobayashi Y]]
{{ABSTRACT_PUBMED_15561149}}
[[Category: Kuramitsu S]]
 
[[Category: Nishimura M]]
==About this Structure==
[[Category: Ohkubo T]]
Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WKI OCA].
[[Category: Shirouzu M]]
 
[[Category: Terada T]]
==Reference==
[[Category: Yokoyama S]]
Solution structure of ribosomal protein L16 from Thermus thermophilus HB8., Nishimura M, Yoshida T, Shirouzu M, Terada T, Kuramitsu S, Yokoyama S, Ohkubo T, Kobayashi Y, J Mol Biol. 2004 Dec 10;344(5):1369-83. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15561149 15561149]
[[Category: Yoshida T]]
[[Category: Kobayashi, Y.]]
[[Category: Kuramitsu, S.]]
[[Category: Nishimura, M.]]
[[Category: Ohkubo, T.]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Shirouzu, M.]]
[[Category: Terada, T.]]
[[Category: Yokoyama, S.]]
[[Category: Yoshida, T.]]
[[Category: Mixed alpha/beta]]
[[Category: Ribosome]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 20:32:42 2008''

Latest revision as of 06:36, 1 May 2024

solution structure of ribosomal protein L16 from thermus thermophilus HB8

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