2avw: Difference between revisions

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{{Seed}}
[[Image:2avw.png|left|200px]]


<!--
==Crystal structure of monoclinic form of streptococcus Mac-1==
The line below this paragraph, containing "STRUCTURE_2avw", creates the "Structure Box" on the page.
<StructureSection load='2avw' size='340' side='right'caption='[[2avw]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2avw]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_MGAS5005 Streptococcus pyogenes MGAS5005]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AVW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AVW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_2avw|  PDB=2avw  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2avw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2avw OCA], [https://pdbe.org/2avw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2avw RCSB], [https://www.ebi.ac.uk/pdbsum/2avw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2avw ProSAT]</span></td></tr>
 
</table>
===Crystal structure of monoclinic form of streptococcus Mac-1===
== Function ==
 
[https://www.uniprot.org/uniprot/Q7DAM2_STRP1 Q7DAM2_STRP1]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_16472742}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 16472742 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/av/2avw_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_16472742}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2AVW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_mgas5005 Streptococcus pyogenes mgas5005]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AVW OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2avw ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Crystal structure of group A streptococcus Mac-1: insight into dimer-mediated specificity for recognition of human IgG., Agniswamy J, Nagiec MJ, Liu M, Schuck P, Musser JM, Sun PD, Structure. 2006 Feb;14(2):225-35. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16472742 16472742]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Streptococcus pyogenes mgas5005]]
[[Category: Streptococcus pyogenes MGAS5005]]
[[Category: Agniswamy, J.]]
[[Category: Agniswamy J]]
[[Category: Liu, M.]]
[[Category: Liu M]]
[[Category: Musser, J M.]]
[[Category: Musser JM]]
[[Category: Nagiec, M J.]]
[[Category: Nagiec MJ]]
[[Category: Schuck, P.]]
[[Category: Schuck P]]
[[Category: Sun, P D.]]
[[Category: Sun PD]]
[[Category: Mac-1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 00:04:06 2008''
Retrieved from "https://proteopedia.org/2avw"