1u5k: Difference between revisions

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{{Seed}}
[[Image:1u5k.png|left|200px]]


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==Recombinational repair protein RecO==
The line below this paragraph, containing "STRUCTURE_1u5k", creates the "Structure Box" on the page.
<StructureSection load='1u5k' size='340' side='right'caption='[[1u5k]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1u5k]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_radiodurans_R1 Deinococcus radiodurans R1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U5K OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U5K FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1u5k|  PDB=1u5k  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u5k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u5k OCA], [https://pdbe.org/1u5k PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u5k RCSB], [https://www.ebi.ac.uk/pdbsum/1u5k PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u5k ProSAT]</span></td></tr>
 
</table>
===Recombinational repair protein RecO===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9RW50_DEIRA Q9RW50_DEIRA] Involved in DNA repair and RecF pathway recombination (By similarity).[HAMAP-Rule:MF_00201][SAAS:SAAS022572_004_002906]
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15458636}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 15458636 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u5/1u5k_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15458636}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1U5K is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Deinococcus_radiodurans_r1 Deinococcus radiodurans r1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U5K OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u5k ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
A novel structure of DNA repair protein RecO from Deinococcus radiodurans., Makharashvili N, Koroleva O, Bera S, Grandgenett DP, Korolev S, Structure. 2004 Oct;12(10):1881-9. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15458636 15458636]
</StructureSection>
[[Category: Deinococcus radiodurans r1]]
[[Category: Deinococcus radiodurans R1]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Bera, S.]]
[[Category: Bera S]]
[[Category: Grandgenett, D P.]]
[[Category: Grandgenett DP]]
[[Category: Korolev, S.]]
[[Category: Korolev S]]
[[Category: Koroleva, O.]]
[[Category: Koroleva O]]
[[Category: Makharashvili, N.]]
[[Category: Makharashvili N]]
[[Category: Obd-fold]]
[[Category: Zn-binding]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 00:47:23 2008''

Latest revision as of 08:44, 14 February 2024

Recombinational repair protein RecO

1u5k, resolution 2.00Å

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