2r1s: Difference between revisions

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{{Seed}}
[[Image:2r1s.png|left|200px]]


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==Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.4 A (Br1)==
The line below this paragraph, containing "STRUCTURE_2r1s", creates the "Structure Box" on the page.
<StructureSection load='2r1s' size='340' side='right'caption='[[2r1s]], [[Resolution|resolution]] 1.40&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2r1s]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1S OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1S FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=5BU:5-BROMO-URIDINE-5-MONOPHOSPHATE'>5BU</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr>
{{STRUCTURE_2r1s|  PDB=2r1s  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1s FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1s OCA], [https://pdbe.org/2r1s PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1s RCSB], [https://www.ebi.ac.uk/pdbsum/2r1s PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1s ProSAT]</span></td></tr>
 
</table>
===Structure of the RNA brominated tridecamer r(GCGUU-5BUGAAACGC) at 1.4 A (Br1)===
__TOC__
 
</StructureSection>
 
[[Category: Large Structures]]
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[[Category: Bombard S]]
The line below this paragraph, {{ABSTRACT_PUBMED_17940138}}, adds the Publication Abstract to the page
[[Category: Timsit Y]]
(as it appears on PubMed at http://www.pubmed.gov), where 17940138 is the PubMed ID number.
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{{ABSTRACT_PUBMED_17940138}}
 
==About this Structure==
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1S OCA].  
 
==Reference==
The 1.3 A resolution structure of the RNA tridecamer r(GCGUUUGAAACGC): metal ion binding correlates with base unstacking and groove contraction., Timsit Y, Bombard S, RNA. 2007 Dec;13(12):2098-107. Epub 2007 Oct 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17940138 17940138]
[[Category: Bombard, S.]]
[[Category: Timsit, Y.]]
[[Category: Asymmetry]]
[[Category: Electrostatic]]
[[Category: Monovalent cation]]
[[Category: Rna]]
[[Category: Structural plasticity]]
 
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Retrieved from "https://proteopedia.org/2r1s"