2pa4: Difference between revisions

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{{Seed}}
[[Image:2pa4.png|left|200px]]


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==Crystal structure of UDP-glucose pyrophosphorylase from Corynebacteria glutamicum in complex with magnesium and UDP-glucose==
The line below this paragraph, containing "STRUCTURE_2pa4", creates the "Structure Box" on the page.
<StructureSection load='2pa4' size='340' side='right'caption='[[2pa4]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2pa4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Corynebacterium_glutamicum_ATCC_13032 Corynebacterium glutamicum ATCC 13032]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PA4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PA4 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=UPG:URIDINE-5-DIPHOSPHATE-GLUCOSE'>UPG</scene></td></tr>
{{STRUCTURE_2pa4|  PDB=2pa4  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pa4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pa4 OCA], [https://pdbe.org/2pa4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pa4 RCSB], [https://www.ebi.ac.uk/pdbsum/2pa4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pa4 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of UDP-glucose pyrophosphorylase from Corynebacteria glutamicum in complex with magnesium and UDP-glucose===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pa/2pa4_consurf.spt"</scriptWhenChecked>
(as it appears on PubMed at http://www.pubmed.gov), where 17567737 is the PubMed ID number.
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    <text>to colour the structure by Evolutionary Conservation</text>
{{ABSTRACT_PUBMED_17567737}}
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pa4 ConSurf].
==About this Structure==
<div style="clear:both"></div>
2PA4 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Corynebacterium_glutamicum Corynebacterium glutamicum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PA4 OCA].  
__TOC__
 
</StructureSection>
==Reference==
[[Category: Corynebacterium glutamicum ATCC 13032]]
Active site geometry of glucose-1-phosphate uridylyltransferase., Thoden JB, Holden HM, Protein Sci. 2007 Jul;16(7):1379-88. Epub 2007 Jun 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17567737 17567737]
[[Category: Large Structures]]
[[Category: Corynebacterium glutamicum]]
[[Category: Holden HM]]
[[Category: Single protein]]
[[Category: Thoden JB]]
[[Category: UTP--glucose-1-phosphate uridylyltransferase]]
[[Category: Holden, H M.]]
[[Category: Thoden, J B.]]
[[Category: Metabolism]]
[[Category: Nucleotidyltransferase]]
[[Category: Phosphorylase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 02:37:04 2008''
Retrieved from "https://proteopedia.org/2pa4"