2qsf: Difference between revisions

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{{Seed}}
[[Image:2qsf.png|left|200px]]


<!--
==Crystal structure of the Rad4-Rad23 complex==
The line below this paragraph, containing "STRUCTURE_2qsf", creates the "Structure Box" on the page.
<StructureSection load='2qsf' size='340' side='right'caption='[[2qsf]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2qsf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QSF FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.35&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2qsf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2qsf OCA], [https://pdbe.org/2qsf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2qsf RCSB], [https://www.ebi.ac.uk/pdbsum/2qsf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2qsf ProSAT]</span></td></tr>
{{STRUCTURE_2qsf| PDB=2qsf |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/RAD4_YEAST RAD4_YEAST] Involved in nucleotide excision repair of DNA damaged with UV light, bulky adducts, or cross-linking agents.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qs/2qsf_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2qsf ConSurf].
<div style="clear:both"></div>


===Crystal structure of the Rad4-Rad23 complex===
==See Also==
 
*[[DNA repair protein Rad4|DNA repair protein Rad4]]
 
*[[UV excision repair protein|UV excision repair protein]]
<!--
__TOC__
The line below this paragraph, {{ABSTRACT_PUBMED_17882165}}, adds the Publication Abstract to the page
</StructureSection>
(as it appears on PubMed at http://www.pubmed.gov), where 17882165 is the PubMed ID number.
[[Category: Large Structures]]
-->
{{ABSTRACT_PUBMED_17882165}}
 
==About this Structure==
2QSF is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QSF OCA].
 
==Reference==
Recognition of DNA damage by the Rad4 nucleotide excision repair protein., Min JH, Pavletich NP, Nature. 2007 Oct 4;449(7162):570-5. Epub 2007 Sep 19. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17882165 17882165]
[[Category: Protein complex]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Saccharomyces cerevisiae]]
[[Category: Min, J H.]]
[[Category: Min J-H]]
[[Category: Pavletich, N P.]]
[[Category: Pavletich NP]]
[[Category: Alpha-beta structure]]
[[Category: Beta hairpin]]
[[Category: Dna binding protein]]
[[Category: Dna repair]]
[[Category: Dna-damage recognition]]
[[Category: Nucleotide excision repair]]
[[Category: Transglutaminase fold]]
[[Category: Xeroderma pigmentosum]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 02:51:35 2008''

Latest revision as of 09:17, 21 February 2024

Crystal structure of the Rad4-Rad23 complex

2qsf, resolution 2.35Å

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