1pdu: Difference between revisions

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{{Seed}}
[[Image:1pdu.png|left|200px]]


<!--
==Ligand-binding domain of Drosophila orphan nuclear receptor DHR38==
The line below this paragraph, containing "STRUCTURE_1pdu", creates the "Structure Box" on the page.
<StructureSection load='1pdu' size='340' side='right'caption='[[1pdu]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1pdu]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PDU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PDU FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pdu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pdu OCA], [https://pdbe.org/1pdu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pdu RCSB], [https://www.ebi.ac.uk/pdbsum/1pdu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pdu ProSAT]</span></td></tr>
{{STRUCTURE_1pdu|  PDB=1pdu  |  SCENE=  }}
</table>
 
== Function ==
===Ligand-binding domain of Drosophila orphan nuclear receptor DHR38===
[https://www.uniprot.org/uniprot/HR38_DROME HR38_DROME] Binds to NGFI-B response elements. Plays an important role in late stages of epidermal metamorphosis.
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_12809604}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 12809604 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/1pdu_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_12809604}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pdu ConSurf].
1PDU is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Drosophila_melanogaster Drosophila melanogaster]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PDU OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
The Drosophila orphan nuclear receptor DHR38 mediates an atypical ecdysteroid signaling pathway., Baker KD, Shewchuk LM, Kozlova T, Makishima M, Hassell A, Wisely B, Caravella JA, Lambert MH, Reinking JL, Krause H, Thummel CS, Willson TM, Mangelsdorf DJ, Cell. 2003 Jun 13;113(6):731-42. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/12809604 12809604]
[[Category: Drosophila melanogaster]]
[[Category: Drosophila melanogaster]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Baker, K D.]]
[[Category: Baker KD]]
[[Category: Caravella, J A.]]
[[Category: Caravella JA]]
[[Category: Hassell, A M.]]
[[Category: Hassell AM]]
[[Category: Korlova, T.]]
[[Category: Korlova T]]
[[Category: Lambert, M H.]]
[[Category: Lambert MH]]
[[Category: Makishima, M.]]
[[Category: Makishima M]]
[[Category: Mangelsdorf, D J.]]
[[Category: Mangelsdorf DJ]]
[[Category: Shewchuk, L M.]]
[[Category: Shewchuk LM]]
[[Category: Wilson, T M.]]
[[Category: Wilson TM]]
[[Category: Wisely, B.]]
[[Category: Wisely B]]
[[Category: Ligand-binding domain]]
[[Category: Nuclear receptor]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 03:58:05 2008''
Retrieved from "https://proteopedia.org/1pdu"