1wpm: Difference between revisions

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{{Seed}}
[[Image:1wpm.png|left|200px]]


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==Structure of Bacillus subtilis inorganic pyrophosphatase==
The line below this paragraph, containing "STRUCTURE_1wpm", creates the "Structure Box" on the page.
<StructureSection load='1wpm' size='340' side='right'caption='[[1wpm]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1wpm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WPM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WPM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_1wpm|  PDB=1wpm |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wpm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wpm OCA], [https://pdbe.org/1wpm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wpm RCSB], [https://www.ebi.ac.uk/pdbsum/1wpm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wpm ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/PPAC_BACSU PPAC_BACSU]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wp/1wpm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wpm ConSurf].
<div style="clear:both"></div>


===Structure of Bacillus subtilis inorganic pyrophosphatase===
==See Also==
 
*[[Inorganic pyrophosphatase 3D structures|Inorganic pyrophosphatase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15533045}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 15533045 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_15533045}}
 
==About this Structure==
1WPM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WPM OCA].
 
==Reference==
Structural studies of metal ions in family II pyrophosphatases: the requirement for a Janus ion., Fabrichniy IP, Lehtio L, Salminen A, Zyryanov AB, Baykov AA, Lahti R, Goldman A, Biochemistry. 2004 Nov 16;43(45):14403-11. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15533045 15533045]
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Inorganic diphosphatase]]
[[Category: Large Structures]]
[[Category: Single protein]]
[[Category: Baykov AA]]
[[Category: Baykov, A A.]]
[[Category: Fabrichniy IP]]
[[Category: Fabrichniy, I P.]]
[[Category: Goldman A]]
[[Category: Goldman, A.]]
[[Category: Lahti R]]
[[Category: Lahti, R.]]
[[Category: Lehtio L]]
[[Category: Lehtio, L.]]
[[Category: Salminen A]]
[[Category: Salminen, A.]]
[[Category: Inorganic pyrophosphatase]]
[[Category: Metal binding]]
[[Category: Ppase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 04:45:10 2008''
Retrieved from "https://proteopedia.org/1wpm"