1yhh: Difference between revisions

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{{Seed}}
[[Image:1yhh.png|left|200px]]


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==Uncyclized precursor structure of S65A Y66S G67A GFP variant==
The line below this paragraph, containing "STRUCTURE_1yhh", creates the "Structure Box" on the page.
<StructureSection load='1yhh' size='340' side='right'caption='[[1yhh]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1yhh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YHH FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yhh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yhh OCA], [https://pdbe.org/1yhh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yhh RCSB], [https://www.ebi.ac.uk/pdbsum/1yhh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yhh ProSAT]</span></td></tr>
{{STRUCTURE_1yhh| PDB=1yhh |  SCENE= }}
</table>
== Function ==
[https://www.uniprot.org/uniprot/GFP_AEQVI GFP_AEQVI] Energy-transfer acceptor. Its role is to transduce the blue chemiluminescence of the protein aequorin into green fluorescent light by energy transfer. Fluoresces in vivo upon receiving energy from the Ca(2+)-activated photoprotein aequorin.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yh/1yhh_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yhh ConSurf].
<div style="clear:both"></div>


===Uncyclized precursor structure of S65A Y66S G67A GFP variant===
==See Also==
 
*[[Green Fluorescent Protein 3D structures|Green Fluorescent Protein 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_15697221}}, adds the Publication Abstract to the page
(as it appears on PubMed at http://www.pubmed.gov), where 15697221 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_15697221}}
 
==About this Structure==
1YHH is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Aequorea_victoria Aequorea victoria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YHH OCA].
 
==Reference==
Understanding GFP chromophore biosynthesis: controlling backbone cyclization and modifying post-translational chemistry., Barondeau DP, Kassmann CJ, Tainer JA, Getzoff ED, Biochemistry. 2005 Feb 15;44(6):1960-70. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15697221 15697221]
[[Category: Aequorea victoria]]
[[Category: Aequorea victoria]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Barondeau, D P.]]
[[Category: Barondeau DP]]
[[Category: Getzoff, E D.]]
[[Category: Getzoff ED]]
[[Category: Kassmann, C J.]]
[[Category: Kassmann CJ]]
[[Category: Tainer, J A.]]
[[Category: Tainer JA]]
[[Category: Chromophore]]
[[Category: Coil-to-helix]]
[[Category: Uncyclized]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 06:47:11 2008''
Retrieved from "https://proteopedia.org/1yhh"