2vfk: Difference between revisions

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{{Seed}}
[[Image:2vfk.png|left|200px]]


<!--
==AKAP18 delta central domain - AMP==
The line below this paragraph, containing "STRUCTURE_2vfk", creates the "Structure Box" on the page.
<StructureSection load='2vfk' size='340' side='right'caption='[[2vfk]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2vfk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VFK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VFK FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene></td></tr>
{{STRUCTURE_2vfk|  PDB=2vfk  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vfk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vfk OCA], [https://pdbe.org/2vfk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vfk RCSB], [https://www.ebi.ac.uk/pdbsum/2vfk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vfk ProSAT]</span></td></tr>
 
</table>
===AKAP18 DELTA CENTRAL DOMAIN- AMP===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
<!--
  <jmolCheckbox>
The line below this paragraph, {{ABSTRACT_PUBMED_18082768}}, adds the Publication Abstract to the page
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vf/2vfk_consurf.spt"</scriptWhenChecked>
(as it appears on PubMed at http://www.pubmed.gov), where 18082768 is the PubMed ID number.
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-->
    <text>to colour the structure by Evolutionary Conservation</text>
{{ABSTRACT_PUBMED_18082768}}
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vfk ConSurf].
==About this Structure==
<div style="clear:both"></div>
2VFK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VFK OCA].  
__TOC__
 
</StructureSection>
==Reference==
AKAP18 contains a phosphoesterase domain that binds AMP., Gold MG, Smith FD, Scott JD, Barford D, J Mol Biol. 2008 Feb 1;375(5):1329-43. Epub 2007 Nov 22. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18082768 18082768]
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Barford, D.]]
[[Category: Barford D]]
[[Category: Gold, M G.]]
[[Category: Gold MG]]
[[Category: Scott, J D.]]
[[Category: Scott JD]]
[[Category: Smith, F D.]]
[[Category: Smith FD]]
[[Category: Apo]]
[[Category: Hydrolase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 07:16:08 2008''

Latest revision as of 07:07, 1 May 2024

AKAP18 delta central domain - AMP

2vfk, resolution 1.50Å

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