1ub9: Difference between revisions

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{{Seed}}
[[Image:1ub9.png|left|200px]]


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==Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3==
The line below this paragraph, containing "STRUCTURE_1ub9", creates the "Structure Box" on the page.
<StructureSection load='1ub9' size='340' side='right'caption='[[1ub9]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1ub9]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UB9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UB9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ub9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ub9 OCA], [https://pdbe.org/1ub9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ub9 RCSB], [https://www.ebi.ac.uk/pdbsum/1ub9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ub9 ProSAT]</span></td></tr>
{{STRUCTURE_1ub9|  PDB=1ub9  |  SCENE=  }}
</table>
 
== Function ==
===Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3===
[https://www.uniprot.org/uniprot/O58788_PYRHO O58788_PYRHO]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
1UB9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UB9 OCA].  
  <jmolCheckbox>
 
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ub/1ub9_consurf.spt"</scriptWhenChecked>
==Reference==
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
Structural analysis of the transcriptional regulator homolog protein from Pyrococcus horikoshii OT3., Okada U, Sakai N, Yao M, Watanabe N, Tanaka I, Proteins. 2006 Jun 1;63(4):1084-6. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16506234 16506234]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Pyrococcus horikoshii]]
  </jmolCheckbox>
[[Category: Single protein]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ub9 ConSurf].
[[Category: Okada, U.]]
<div style="clear:both"></div>
[[Category: Sakai, N.]]
__TOC__
[[Category: Tajika, Y.]]
</StructureSection>
[[Category: Tanaka, I.]]
[[Category: Large Structures]]
[[Category: Watanabe, N.]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Yao, M.]]
[[Category: Okada U]]
[[Category: Helix-turn-helix motif]]
[[Category: Sakai N]]
[[Category: Structural genomic]]
[[Category: Tajika Y]]
[[Category: Winged helix motif]]
[[Category: Tanaka I]]
 
[[Category: Watanabe N]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 08:24:09 2008''
[[Category: Yao M]]
Retrieved from "https://proteopedia.org/1ub9"