1wv5: Difference between revisions

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{{Seed}}
[[Image:1wv5.png|left|200px]]


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==X-ray structure of the A-decamer GCGTATACGC with a single 2'-o-butyl thymine in place of T6, Mg-form==
The line below this paragraph, containing "STRUCTURE_1wv5", creates the "Structure Box" on the page.
<StructureSection load='1wv5' size='340' side='right'caption='[[1wv5]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1wv5]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WV5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WV5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=2BT:2-O-BUTYL-THYMIDINE'>2BT</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_1wv5|  PDB=1wv5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wv5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wv5 OCA], [https://pdbe.org/1wv5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wv5 RCSB], [https://www.ebi.ac.uk/pdbsum/1wv5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wv5 ProSAT]</span></td></tr>
 
</table>
===X-ray structure of the A-decamer GCGTATACGC with a single 2'-o-butyl thymine in place of T6, Mg-form===
__TOC__
 
</StructureSection>
 
[[Category: Large Structures]]
<!--
[[Category: Egli M]]
The line below this paragraph, {{ABSTRACT_PUBMED_15966728}}, adds the Publication Abstract to the page
[[Category: Inamati GB]]
(as it appears on PubMed at http://www.pubmed.gov), where 15966728 is the PubMed ID number.
[[Category: Lesnik EA]]
-->
[[Category: Manoharam M]]
{{ABSTRACT_PUBMED_15966728}}
[[Category: Minasov G]]
 
[[Category: Owens SR]]
==About this Structure==
[[Category: Pallan PS]]
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WV5 OCA].  
[[Category: Prakash TP]]
 
[[Category: Ross BS]]
==Reference==
[[Category: Teplova M]]
Probing the influence of stereoelectronic effects on the biophysical properties of oligonucleotides: comprehensive analysis of the RNA affinity, nuclease resistance, and crystal structure of ten 2'-O-ribonucleic acid modifications., Egli M, Minasov G, Tereshko V, Pallan PS, Teplova M, Inamati GB, Lesnik EA, Owens SR, Ross BS, Prakash TP, Manoharan M, Biochemistry. 2005 Jun 28;44(25):9045-57. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15966728 15966728]
[[Category: Tereshko V]]
[[Category: Egli, M.]]
[[Category: Inamati, G B.]]
[[Category: Lesnik, E A.]]
[[Category: Manoharam, M.]]
[[Category: Minasov, G.]]
[[Category: Owens, S R.]]
[[Category: Pallan, P S.]]
[[Category: Prakash, T P.]]
[[Category: Ross, B S.]]
[[Category: Teplova, M.]]
[[Category: Tereshko, V.]]
[[Category: Dna]]
 
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Retrieved from "https://proteopedia.org/1wv5"