1u9l: Difference between revisions

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{{Seed}}
[[Image:1u9l.png|left|200px]]


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==Structural basis for a NusA- protein N interaction==
The line below this paragraph, containing "STRUCTURE_1u9l", creates the "Structure Box" on the page.
<StructureSection load='1u9l' size='340' side='right'caption='[[1u9l]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1u9l]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U9L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U9L FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AU:GOLD+ION'>AU</scene></td></tr>
{{STRUCTURE_1u9l|  PDB=1u9l  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u9l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u9l OCA], [https://pdbe.org/1u9l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u9l RCSB], [https://www.ebi.ac.uk/pdbsum/1u9l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u9l ProSAT]</span></td></tr>
 
</table>
===Structural basis for a NusA- protein N interaction===
== Function ==
 
[https://www.uniprot.org/uniprot/NUSA_ECOLI NUSA_ECOLI] Participates in both transcription termination and antitermination. Involved in a variety of cellular and viral termination and antitermination processes, such as Rho-dependent transcriptional termination, intrinsic termination, and phage lambda N-mediated transcriptional antitermination. Also important for coordinating the cellular responses to DNA damage by coupling the processes of nucleotide excision repair and translesion synthesis to transcription.<ref>PMID:6263495</ref> <ref>PMID:6265785</ref> <ref>PMID:6199039</ref> <ref>PMID:2821282</ref> <ref>PMID:7536848</ref> <ref>PMID:9139668</ref> <ref>PMID:11719185</ref> <ref>PMID:20696893</ref> <ref>PMID:21922055</ref>
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_15365170}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 15365170 is the PubMed ID number.
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u9/1u9l_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_15365170}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
1U9L is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U9L OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u9l ConSurf].
 
<div style="clear:both"></div>
==Reference==
== References ==
Structural basis for the interaction of Escherichia coli NusA with protein N of phage lambda., Bonin I, Muhlberger R, Bourenkov GP, Huber R, Bacher A, Richter G, Wahl MC, Proc Natl Acad Sci U S A. 2004 Sep 21;101(38):13762-7. Epub 2004 Sep 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15365170 15365170]
<references/>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Bacher, A.]]
[[Category: Bacher A]]
[[Category: Bonin, I.]]
[[Category: Bonin I]]
[[Category: Bourenkov, G P.]]
[[Category: Bourenkov GP]]
[[Category: Huber, R.]]
[[Category: Huber R]]
[[Category: Muehlberger, R.]]
[[Category: Muehlberger R]]
[[Category: Richter, G.]]
[[Category: Richter G]]
[[Category: Wahl, M C.]]
[[Category: Wahl MC]]
[[Category: Escherichia coli nusa]]
[[Category: Phage lambda protein n]]
[[Category: Regulation of rna binding]]
[[Category: Transcription antitermination]]
[[Category: X-ray crystallography]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 10:05:59 2008''

Latest revision as of 13:31, 13 March 2024

Structural basis for a NusA- protein N interaction

1u9l, resolution 1.90Å

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