1zz0: Difference between revisions

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{{Seed}}
[[Image:1zz0.png|left|200px]]


<!--
==Crystal structure of a HDAC-like protein with acetate bound==
The line below this paragraph, containing "STRUCTURE_1zz0", creates the "Structure Box" on the page.
<StructureSection load='1zz0' size='340' side='right'caption='[[1zz0]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1zz0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Alcaligenaceae_bacterium_FB188 Alcaligenaceae bacterium FB188]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZZ0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1ZZ0 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_1zz0|  PDB=1zz0 |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1zz0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1zz0 OCA], [https://pdbe.org/1zz0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1zz0 RCSB], [https://www.ebi.ac.uk/pdbsum/1zz0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1zz0 ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/HDAH_ALCSD HDAH_ALCSD]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zz/1zz0_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1zz0 ConSurf].
<div style="clear:both"></div>


===Crystal structure of a HDAC-like protein with acetate bound===
==See Also==
 
*[[Histone deacetylase 3D structures|Histone deacetylase 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_16242151}}, adds the Publication Abstract to the page
[[Category: Alcaligenaceae bacterium FB188]]
(as it appears on PubMed at http://www.pubmed.gov), where 16242151 is the PubMed ID number.
[[Category: Large Structures]]
-->
[[Category: Dickmanns A]]
{{ABSTRACT_PUBMED_16242151}}
[[Category: Ficner R]]
 
[[Category: Hildmann C]]
==About this Structure==
[[Category: Nielsen TK]]
1ZZ0 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bordetella_sp. Bordetella sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1ZZ0 OCA].
[[Category: Schwienhorst A]]
 
==Reference==
Crystal structure of a bacterial class 2 histone deacetylase homologue., Nielsen TK, Hildmann C, Dickmanns A, Schwienhorst A, Ficner R, J Mol Biol. 2005 Nov 18;354(1):107-20. Epub 2005 Oct 7. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16242151 16242151]
[[Category: Bordetella sp.]]
[[Category: Single protein]]
[[Category: Dickmanns, A.]]
[[Category: Ficner, R.]]
[[Category: Hildmann, C.]]
[[Category: Nielsen, T K.]]
[[Category: Schwienhorst, A.]]
[[Category: Hydrolase]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 14:12:16 2008''
Retrieved from "https://proteopedia.org/1zz0"