2ze3: Difference between revisions

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{{Seed}}
[[Image:2ze3.jpg|left|200px]]


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==Crystal Structure of DFA0005 Complexed with alpha-Ketoglutarate: A Novel Member of the ICL/PEPM Superfamily from Alkali-tolerant Deinococcus ficus==
The line below this paragraph, containing "STRUCTURE_2ze3", creates the "Structure Box" on the page.
<StructureSection load='2ze3' size='340' side='right'caption='[[2ze3]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2ze3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Deinococcus_ficus Deinococcus ficus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZE3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AKG:2-OXOGLUTARIC+ACID'>AKG</scene></td></tr>
{{STRUCTURE_2ze3|  PDB=2ze3  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ze3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ze3 OCA], [https://pdbe.org/2ze3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ze3 RCSB], [https://www.ebi.ac.uk/pdbsum/2ze3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ze3 ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of DFA0005 Complexed with alpha-Ketoglutarate: A Novel Member of the ICL/PEPM Superfamily from Alkali-tolerant Deinococcus ficus===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
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The line below this paragraph, {{ABSTRACT_PUBMED_18433062}}, adds the Publication Abstract to the page
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ze/2ze3_consurf.spt"</scriptWhenChecked>
(as it appears on PubMed at http://www.pubmed.gov), where 18433062 is the PubMed ID number.
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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    <text>to colour the structure by Evolutionary Conservation</text>
{{ABSTRACT_PUBMED_18433062}}
  </jmolCheckbox>
 
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ze3 ConSurf].
==About this Structure==
<div style="clear:both"></div>
2ZE3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Deinococcus_ficus Deinococcus ficus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZE3 OCA].  
__TOC__
 
</StructureSection>
==Reference==
Crystal structure of DFA0005 complexed with alpha-ketoglutarate: A novel member of the ICL/PEPM superfamily from alkali-tolerant Deinococcus ficus., Liao CJ, Chin KH, Lin CH, Tsai PS, Lyu PC, Young CC, Wang AH, Chou SH, Proteins. 2008 Apr 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18433062 18433062]
[[Category: Deinococcus ficus]]
[[Category: Deinococcus ficus]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Chin, K H.]]
[[Category: Chin KH]]
[[Category: Chou, S H.]]
[[Category: Chou SH]]
[[Category: Liao, C J.]]
[[Category: Liao CJ]]
[[Category: Alkaliphilic]]
[[Category: Alpha-ketoglutarate ligand]]
[[Category: Deinococcus ficus]]
[[Category: Icl/pepm superfamily]]
[[Category: Isomerase]]
[[Category: Organic waste left-over decomposition]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 13 13:53:28 2008''

Latest revision as of 13:57, 13 March 2024

Crystal Structure of DFA0005 Complexed with alpha-Ketoglutarate: A Novel Member of the ICL/PEPM Superfamily from Alkali-tolerant Deinococcus ficus

2ze3, resolution 1.65Å

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