3clc: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,328,572 edits
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3clc.png|left|200px]]


<!--
==Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator==
The line below this paragraph, containing "STRUCTURE_3clc", creates the "Structure Box" on the page.
<StructureSection load='3clc' size='340' side='right'caption='[[3clc]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3clc]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Enterobacter_sp._RFL1396 Enterobacter sp. RFL1396]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CLC FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3clc|  PDB=3clc  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3clc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3clc OCA], [https://pdbe.org/3clc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3clc RCSB], [https://www.ebi.ac.uk/pdbsum/3clc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3clc ProSAT]</span></td></tr>
 
</table>
===Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8GGH0_9ENTR Q8GGH0_9ENTR]  
 
== Evolutionary Conservation ==
<!--
[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18644840}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 18644840 is the PubMed ID number.
  <jmolCheckbox>
-->
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cl/3clc_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18644840}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
3CLC is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Enterobacter_sp._rfl1396 Enterobacter sp. rfl1396]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CLC OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3clc ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Structural analysis of the genetic switch that regulates the expression of restriction-modification genes., McGeehan JE, Streeter SD, Thresh SJ, Ball N, Ravelli RB, Kneale GG, Nucleic Acids Res. 2008 Aug;36(14):4778-87. Epub 2008 Jul 21. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18644840 18644840]
</StructureSection>
[[Category: Enterobacter sp. rfl1396]]
[[Category: Enterobacter sp. RFL1396]]
[[Category: Protein complex]]
[[Category: Large Structures]]
[[Category: Ball, N.]]
[[Category: Ball N]]
[[Category: Kneale, G G.]]
[[Category: Kneale GG]]
[[Category: McGeehan, J E.]]
[[Category: McGeehan JE]]
[[Category: Ravelli, R B.]]
[[Category: Ravelli RB]]
[[Category: Streeter, S D.]]
[[Category: Streeter SD]]
[[Category: Thresh, S J.]]
[[Category: Thresh SJ]]
[[Category: Dna-bending]]
[[Category: Helix-turn-helix]]
[[Category: Plasmid]]
[[Category: Protein-dna complex]]
[[Category: Transcription regulator/dna complex]]
[[Category: Transcriptional regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 20 11:22:34 2008''

Latest revision as of 09:36, 21 February 2024

Crystal Structure of the Restriction-Modification Controller Protein C.Esp1396I Tetramer in Complex with its Natural 35 Base-Pair Operator

3clc, resolution 2.80Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "https://proteopedia.org/index.php?title=3clc&oldid=4063939"