2k5d: Difference between revisions

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{{Seed}}
[[Image:2k5d.jpg|left|200px]]


<!--
==SOLUTION NMR STRUCTURE OF SAG0934 from Streptococcus agalactiae. NORTHEAST STRUCTURAL GENOMICS TARGET SaR32[1-108].==
The line below this paragraph, containing "STRUCTURE_2k5d", creates the "Structure Box" on the page.
<StructureSection load='2k5d' size='340' side='right'caption='[[2k5d]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2k5d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_V Streptococcus agalactiae serogroup V]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K5D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5d OCA], [https://pdbe.org/2k5d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k5d RCSB], [https://www.ebi.ac.uk/pdbsum/2k5d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k5d ProSAT], [https://www.topsan.org/Proteins/NESGC/2k5d TOPSAN]</span></td></tr>
{{STRUCTURE_2k5d|  PDB=2k5d  |  SCENE=  }}
</table>
 
== Function ==
===SOLUTION NMR STRUCTURE OF SAG0934 from Streptococcus agalactiae. NORTHEAST STRUCTURAL GENOMICS TARGET SaR32[1-108].===
[https://www.uniprot.org/uniprot/Q8E006_STRA5 Q8E006_STRA5]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2K5D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_agalactiae_serogroup_v Streptococcus agalactiae serogroup v]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5D OCA].  
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5d_consurf.spt"</scriptWhenChecked>
[[Category: Streptococcus agalactiae serogroup v]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Acton, T B.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Aramini, J M.]]
  </jmolCheckbox>
[[Category: Everett, J K.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k5d ConSurf].
[[Category: Foote, E L.]]
<div style="clear:both"></div>
[[Category: Jiang, M.]]
__TOC__
[[Category: Montelione, G T.]]
</StructureSection>
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Large Structures]]
[[Category: Nair, R.]]
[[Category: Streptococcus agalactiae serogroup V]]
[[Category: Rossi, P.]]
[[Category: Acton TB]]
[[Category: Rost, B.]]
[[Category: Aramini JM]]
[[Category: Sharma, S.]]
[[Category: Everett JK]]
[[Category: Swapna, G VT.]]
[[Category: Foote EL]]
[[Category: Xiao, R.]]
[[Category: Jiang M]]
[[Category: Zhao, L.]]
[[Category: Montelione GT]]
[[Category: Construct optimized]]
[[Category: Nair R]]
[[Category: Duf961]]
[[Category: Rossi P]]
[[Category: Nesg]]
[[Category: Rost B]]
[[Category: Northeast structural genomics consortium]]
[[Category: Sharma S]]
[[Category: Primosomal protein]]
[[Category: Swapna GVT]]
[[Category: Protein structure initiative]]
[[Category: Xiao R]]
[[Category: Psi-2]]
[[Category: Zhao L]]
[[Category: Solution nmr structure]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 27 11:04:25 2008''
Retrieved from "https://proteopedia.org/2k5d"