2jv6: Difference between revisions

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{{Seed}}
[[Image:2jv6.jpg|left|200px]]


<!--
==YF ED3 Protein NMR Structure==
The line below this paragraph, containing "STRUCTURE_2jv6", creates the "Structure Box" on the page.
<StructureSection load='2jv6' size='340' side='right'caption='[[2jv6]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2jv6]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Yellow_fever_virus Yellow fever virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JV6 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JV6 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jv6 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jv6 OCA], [https://pdbe.org/2jv6 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jv6 RCSB], [https://www.ebi.ac.uk/pdbsum/2jv6 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jv6 ProSAT]</span></td></tr>
{{STRUCTURE_2jv6|  PDB=2jv6  |  SCENE=  }}
</table>
 
== Evolutionary Conservation ==
===YF ED3 Protein NMR Structure===
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
 
  <jmolCheckbox>
==About this Structure==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jv/2jv6_consurf.spt"</scriptWhenChecked>
2JV6 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Yellow_fever_virus Yellow fever virus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JV6 OCA].  
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jv6 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Yellow fever virus]]
[[Category: Yellow fever virus]]
[[Category: Anderson, A.]]
[[Category: Anderson A]]
[[Category: Barrett, A D.T.]]
[[Category: Barrett ADT]]
[[Category: Gandham, S H.A.]]
[[Category: Gandham SHA]]
[[Category: Gorenstein, D G.]]
[[Category: Gorenstein DG]]
[[Category: May, F J.]]
[[Category: May FJ]]
[[Category: Volk, D E.]]
[[Category: Volk DE]]
[[Category: Atp-binding]]
[[Category: Capsid protein]]
[[Category: Cleavage on pair of basic residue]]
[[Category: Endoplasmic reticulum]]
[[Category: Envelop protein domain iii]]
[[Category: Envelope protein]]
[[Category: Flavivirus]]
[[Category: Glycoprotein]]
[[Category: Helicase]]
[[Category: Hydrolase]]
[[Category: Membrane]]
[[Category: Metal-binding]]
[[Category: Multifunctional enzyme]]
[[Category: Nucleotide-binding]]
[[Category: Nucleotidyltransferase]]
[[Category: Nucleus]]
[[Category: Phosphorylation]]
[[Category: Protease]]
[[Category: Ribonucleoprotein]]
[[Category: Rna replication]]
[[Category: Rna-binding]]
[[Category: Rna-directed rna polymerase]]
[[Category: Secreted]]
[[Category: Serine protease]]
[[Category: Transferase]]
[[Category: Transmembrane]]
[[Category: Viral nucleoprotein]]
[[Category: Viral protein]]
[[Category: Virion]]
[[Category: Yellow fever]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 17 14:05:12 2008''
Retrieved from "https://proteopedia.org/2jv6"