3dpg: Difference between revisions

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{{Seed}}
[[Image:3dpg.png|left|200px]]


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==SgrAI with noncognate DNA bound==
The line below this paragraph, containing "STRUCTURE_3dpg", creates the "Structure Box" on the page.
<StructureSection load='3dpg' size='340' side='right'caption='[[3dpg]], [[Resolution|resolution]] 1.91&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dpg]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DPG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DPG FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.91&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr>
{{STRUCTURE_3dpg|  PDB=3dpg  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dpg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dpg OCA], [https://pdbe.org/3dpg PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dpg RCSB], [https://www.ebi.ac.uk/pdbsum/3dpg PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dpg ProSAT]</span></td></tr>
 
</table>
===SgrAI with noncognate DNA bound===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9F6L0_STRGR Q9F6L0_STRGR]  
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_18701646}}, adds the Publication Abstract to the page
[[Category: Large Structures]]
(as it appears on PubMed at http://www.pubmed.gov), where 18701646 is the PubMed ID number.
-->
{{ABSTRACT_PUBMED_18701646}}
 
==About this Structure==
3DPG is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Streptomyces_griseus Streptomyces griseus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DPG OCA].  
 
==Reference==
The structure of SgrAI bound to DNA; recognition of an 8 base pair target., Dunten PW, Little EJ, Gregory MT, Manohar VM, Dalton M, Hough D, Bitinaite J, Horton NC, Nucleic Acids Res. 2008 Sep;36(16):5405-16. Epub 2008 Aug 13. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18701646 18701646]
[[Category: Protein complex]]
[[Category: Streptomyces griseus]]
[[Category: Streptomyces griseus]]
[[Category: Type II site-specific deoxyribonuclease]]
[[Category: Dunten PW]]
[[Category: Dunten, P W.]]
[[Category: Horton NC]]
[[Category: Horton, N C.]]
[[Category: Little EJ]]
[[Category: Little, E J.]]
[[Category: Base-pair mismatch]]
[[Category: Hydrolase/dna complex]]
[[Category: Restriction enzyme/dna complex]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Sep 24 09:04:07 2008''

Latest revision as of 09:42, 21 February 2024

SgrAI with noncognate DNA bound

3dpg, resolution 1.91Å

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