3dnp: Difference between revisions

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{{Seed}}
[[Image:3dnp.png|left|200px]]


<!--
==Crystal structure of Stress response protein yhaX from Bacillus subtilis==
The line below this paragraph, containing "STRUCTURE_3dnp", creates the "Structure Box" on the page.
<StructureSection load='3dnp' size='340' side='right'caption='[[3dnp]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dnp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DNP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3dnp|  PDB=3dnp  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dnp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dnp OCA], [https://pdbe.org/3dnp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dnp RCSB], [https://www.ebi.ac.uk/pdbsum/3dnp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dnp ProSAT], [https://www.topsan.org/Proteins/MCSG/3dnp TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of Stress response protein yhaX from Bacillus subtilis===
== Function ==
 
[https://www.uniprot.org/uniprot/YHAX_BACSU YHAX_BACSU]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3DNP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DNP OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/3dnp_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dnp ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Chang, C.]]
[[Category: Chang C]]
[[Category: Jedrzejczak, R.]]
[[Category: Jedrzejczak R]]
[[Category: Joachimiak, A.]]
[[Category: Joachimiak A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Tesar C]]
[[Category: Tesar, C.]]
[[Category: Bacillus subtili]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Stress response]]
[[Category: Stress response protein yhax]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 14:58:32 2008''

Latest revision as of 08:59, 30 October 2024

Crystal structure of Stress response protein yhaX from Bacillus subtilis

3dnp, resolution 1.85Å

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