2d0q: Difference between revisions

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{{Seed}}
[[Image:2d0q.png|left|200px]]


<!--
==Complex of Fe-type NHase with Cyclohexyl isocyanide, photo-activated for 1hr at 277K==
The line below this paragraph, containing "STRUCTURE_2d0q", creates the "Structure Box" on the page.
<StructureSection load='2d0q' size='340' side='right'caption='[[2d0q]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2d0q]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodococcus_erythropolis Rhodococcus erythropolis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D0Q OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2D0Q FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CSD:3-SULFINOALANINE'>CSD</scene>, <scene name='pdbligand=CYI:CYCLOHEXYL+ISOCYANIDE'>CYI</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_2d0q| PDB=2d0q |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2d0q FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2d0q OCA], [https://pdbe.org/2d0q PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2d0q RCSB], [https://www.ebi.ac.uk/pdbsum/2d0q PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2d0q ProSAT], [https://www.topsan.org/Proteins/RSGI/2d0q TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/NHAA_RHOER NHAA_RHOER] NHase catalyzes the hydration of various nitrile compounds to the corresponding amides. Industrial production of acrylamide is now being developed using some of the enzymes of this class.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d0/2d0q_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2d0q ConSurf].
<div style="clear:both"></div>


===Complex of Fe-type NHase with Cyclohexyl isocyanide, photo-activated for 1hr at 277K===
==See Also==
 
*[[Nitrile hydratase|Nitrile hydratase]]
 
__TOC__
==About this Structure==
</StructureSection>
2D0Q is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Rhodococcus_erythropolis Rhodococcus erythropolis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2D0Q OCA].
[[Category: Large Structures]]
[[Category: Nitrile hydratase]]
[[Category: Protein complex]]
[[Category: Rhodococcus erythropolis]]
[[Category: Rhodococcus erythropolis]]
[[Category: Hashimoto, K.]]
[[Category: Hashimoto K]]
[[Category: Kamiya, N.]]
[[Category: Kamiya N]]
[[Category: Kawano, Y.]]
[[Category: Kawano Y]]
[[Category: Nojiri, M.]]
[[Category: Nojiri M]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Complex]]
[[Category: Cysteine-sulfenic acid]]
[[Category: Cysteine-sulfinic acid]]
[[Category: Hydration]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nitrile]]
[[Category: Nppsfa]]
[[Category: Photo-reactive]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Substrate analogue]]
 
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Retrieved from "https://proteopedia.org/2d0q"