3cz8: Difference between revisions

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{{Seed}}
[[Image:3cz8.png|left|200px]]


<!--
==Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis==
The line below this paragraph, containing "STRUCTURE_3cz8", creates the "Structure Box" on the page.
<StructureSection load='3cz8' size='340' side='right'caption='[[3cz8]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3cz8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CZ8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
{{STRUCTURE_3cz8|  PDB=3cz8  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cz8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cz8 OCA], [https://pdbe.org/3cz8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cz8 RCSB], [https://www.ebi.ac.uk/pdbsum/3cz8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cz8 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3cz8 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of putative sporulation-specific glycosylase ydhD from Bacillus subtilis===
== Function ==
 
[https://www.uniprot.org/uniprot/YDHD_BACSU YDHD_BACSU]
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3CZ8 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis_subsp._subtilis_str._168 Bacillus subtilis subsp. subtilis str. 168]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CZ8 OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cz/3cz8_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cz8 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Bacillus subtilis subsp. subtilis str. 168]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Almo, S C.]]
[[Category: Almo SC]]
[[Category: Burley, S K.]]
[[Category: Burley SK]]
[[Category: Chang, S.]]
[[Category: Chang S]]
[[Category: Maletic, M.]]
[[Category: Maletic M]]
[[Category: NYSGXRC, New York Structural GenomiX Research Consortium.]]
[[Category: Patskovsky Y]]
[[Category: Patskovsky, Y.]]
[[Category: Romero R]]
[[Category: Romero, R.]]
[[Category: Rutter M]]
[[Category: Rutter, M.]]
[[Category: Sauder JM]]
[[Category: Sauder, J M.]]
[[Category: Smith D]]
[[Category: Smith, D.]]
[[Category: Wasserman SR]]
[[Category: Wasserman, S R.]]
[[Category: Carbohydrate metabolism]]
[[Category: Glycosidase]]
[[Category: Hydrolase]]
[[Category: New york structural genomix research consortium]]
[[Category: Nysgxrc]]
[[Category: Polysaccharide degradation]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Sporulation]]
[[Category: Structural genomic]]
[[Category: Uncharacterized protein]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 16:11:50 2008''
Retrieved from "https://proteopedia.org/3cz8"