2dnv: Difference between revisions

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{{Seed}}
[[Image:2dnv.png|left|200px]]


<!--
==Solution Structure of RSGI RUH-055, a Chromo Domain from Mus musculus cDNA==
The line below this paragraph, containing "STRUCTURE_2dnv", creates the "Structure Box" on the page.
<StructureSection load='2dnv' size='340' side='right'caption='[[2dnv]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2dnv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DNV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DNV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dnv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dnv OCA], [https://pdbe.org/2dnv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dnv RCSB], [https://www.ebi.ac.uk/pdbsum/2dnv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dnv ProSAT], [https://www.topsan.org/Proteins/RSGI/2dnv TOPSAN]</span></td></tr>
{{STRUCTURE_2dnv|  PDB=2dnv  |  SCENE=  }}
</table>
 
== Function ==
===Solution Structure of RSGI RUH-055, a Chromo Domain from Mus musculus cDNA===
[https://www.uniprot.org/uniprot/CBX8_MOUSE CBX8_MOUSE] Component of a Polycomb group (PcG) multiprotein PRC1-like complex, a complex class required to maintain the transcriptionally repressive state of many genes, including Hox genes, throughout development. PcG PRC1 complex acts via chromatin remodeling and modification of histones; it mediates monoubiquitination of histone H2A 'Lys-119', rendering chromatin heritably changed in its expressibility (By similarity).
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2DNV is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DNV OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dn/2dnv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dnv ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
[[Category: Single protein]]
[[Category: Hirota H]]
[[Category: Hirota, H.]]
[[Category: Kigawa T]]
[[Category: Kigawa, T.]]
[[Category: Ruhul Momen AZM]]
[[Category: Momen, A Z.M Ruhul.]]
[[Category: Tomizawa T]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Yokoyama S]]
[[Category: Tomizawa, T.]]
[[Category: Yokoyama, S.]]
[[Category: Choromatin organization modifier]]
[[Category: Chromo domain]]
[[Category: Histone h3 tail]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 16:39:29 2008''

Latest revision as of 18:45, 29 May 2024

Solution Structure of RSGI RUH-055, a Chromo Domain from Mus musculus cDNA

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