1xi9: Difference between revisions

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{{Seed}}
[[Image:1xi9.png|left|200px]]


<!--
==Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001==
The line below this paragraph, containing "STRUCTURE_1xi9", creates the "Structure Box" on the page.
<StructureSection load='1xi9' size='340' side='right'caption='[[1xi9]], [[Resolution|resolution]] 2.33&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1xi9]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus_DSM_3638 Pyrococcus furiosus DSM 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XI9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XI9 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.33&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PLP:PYRIDOXAL-5-PHOSPHATE'>PLP</scene></td></tr>
{{STRUCTURE_1xi9|  PDB=1xi9  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xi9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xi9 OCA], [https://pdbe.org/1xi9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xi9 RCSB], [https://www.ebi.ac.uk/pdbsum/1xi9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xi9 ProSAT], [https://www.topsan.org/Proteins/SECSG/1xi9 TOPSAN]</span></td></tr>
 
</table>
===Alanine aminotransferase from Pyrococcus furiosus Pfu-1397077-001===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9P9M8_9EURY Q9P9M8_9EURY]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1XI9 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus_dsm_3638 Pyrococcus furiosus dsm 3638]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XI9 OCA].  
Check<jmol>
[[Category: Pyrococcus furiosus dsm 3638]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xi/1xi9_consurf.spt"</scriptWhenChecked>
[[Category: Adams, M W.W.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Brereton, P S.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Chang, S H.]]
  </jmolCheckbox>
[[Category: Chen, L.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xi9 ConSurf].
[[Category: II, F L.Poole.]]
<div style="clear:both"></div>
[[Category: III, W B.Arendall.]]
__TOC__
[[Category: Izumi, M.]]
</StructureSection>
[[Category: Jr., F E.Jenney.]]
[[Category: Large Structures]]
[[Category: Lee, D.]]
[[Category: Pyrococcus furiosus DSM 3638]]
[[Category: Lee, H S.]]
[[Category: Adams MWW]]
[[Category: Lin, D.]]
[[Category: Arendall III WB]]
[[Category: Liu, Z J.]]
[[Category: Brereton PS]]
[[Category: Richardson, D C.]]
[[Category: Chang S-H]]
[[Category: Richardson, J S.]]
[[Category: Chen L]]
[[Category: Rose, J P.]]
[[Category: Izumi M]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Jenney Jr FE]]
[[Category: Shah, A.]]
[[Category: Lee D]]
[[Category: Shah, C.]]
[[Category: Lee H-S]]
[[Category: Sugar, F J.]]
[[Category: Lin D]]
[[Category: Tempel, W.]]
[[Category: Liu Z-J]]
[[Category: Wang, B C.]]
[[Category: Poole II FL]]
[[Category: Zhou, W.]]
[[Category: Richardson DC]]
[[Category: Alanine aminotransferase]]
[[Category: Richardson JS]]
[[Category: Hyperthermophile]]
[[Category: Rose JP]]
[[Category: Protein structure initiative]]
[[Category: Shah A]]
[[Category: Psi]]
[[Category: Shah C]]
[[Category: Pyrococcus furiosus]]
[[Category: Sugar FJ]]
[[Category: Secsg]]
[[Category: Tempel W]]
[[Category: Southeast collaboratory for structural genomic]]
[[Category: Wang B-C]]
 
[[Category: Zhou W]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 17:28:53 2008''
Retrieved from "https://proteopedia.org/1xi9"