1sdi: Difference between revisions

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{{Seed}}
[[Image:1sdi.png|left|200px]]


<!--
==1.65 A structure of Escherichia coli ycfC gene product==
The line below this paragraph, containing "STRUCTURE_1sdi", creates the "Structure Box" on the page.
<StructureSection load='1sdi' size='340' side='right'caption='[[1sdi]], [[Resolution|resolution]] 1.65&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1sdi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SDI FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.65&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
{{STRUCTURE_1sdi|  PDB=1sdi  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sdi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sdi OCA], [https://pdbe.org/1sdi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sdi RCSB], [https://www.ebi.ac.uk/pdbsum/1sdi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sdi ProSAT], [https://www.topsan.org/Proteins/MCSG/1sdi TOPSAN]</span></td></tr>
 
</table>
===1.65 A structure of Escherichia coli ycfC gene product===
== Function ==
 
[https://www.uniprot.org/uniprot/HFLD_ECOLI HFLD_ECOLI] Negative regulator of phage lambda lysogenization. Contributes to the degradation of the phage regulatory protein CII. Acts probably by holding CII on the membrane surface, away from the target promoters, but close to the FtsH protease.<ref>PMID:11278968</ref>
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1SDI is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDI OCA].  
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sd/1sdi_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sdi ConSurf].
<div style="clear:both"></div>
== References ==
<references/>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Borek, D.]]
[[Category: Borek D]]
[[Category: Chen, Y.]]
[[Category: Chen Y]]
[[Category: Edwards, A.]]
[[Category: Edwards A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Otwinowski Z]]
[[Category: Otwinowski, Z.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Skarina T]]
[[Category: Skarina, T.]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Paracytosis]]
[[Category: Peripheral membrane protein]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Sep 28 21:11:46 2008''
Retrieved from "https://proteopedia.org/1sdi"