2pcn: Difference between revisions

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{{Seed}}
[[Image:2pcn.png|left|200px]]


<!--
==Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426==
The line below this paragraph, containing "STRUCTURE_2pcn", creates the "Structure Box" on the page.
<StructureSection load='2pcn' size='340' side='right'caption='[[2pcn]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2pcn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_kaustophilus_HTA426 Geobacillus kaustophilus HTA426]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PCN FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene></td></tr>
{{STRUCTURE_2pcn|  PDB=2pcn  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pcn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pcn OCA], [https://pdbe.org/2pcn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pcn RCSB], [https://www.ebi.ac.uk/pdbsum/2pcn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pcn ProSAT], [https://www.topsan.org/Proteins/RSGI/2pcn TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of S-adenosylmethionine: 2-dimethylmenaquinone methyltransferase (gk_1813) from geobacillus kaustophilus HTA426===
== Function ==
 
[https://www.uniprot.org/uniprot/Q5KYY8_GEOKA Q5KYY8_GEOKA]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2PCN is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_kaustophilus Geobacillus kaustophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PCN OCA].  
Check<jmol>
[[Category: Geobacillus kaustophilus]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pc/2pcn_consurf.spt"</scriptWhenChecked>
[[Category: Agari, Y.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Ebihara, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Jeyakanthan, J.]]
  </jmolCheckbox>
[[Category: Kanaujia, S P.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pcn ConSurf].
[[Category: Kuramitsu, S.]]
<div style="clear:both"></div>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
__TOC__
[[Category: Rafi, Z A.]]
</StructureSection>
[[Category: Sekar, K.]]
[[Category: Geobacillus kaustophilus HTA426]]
[[Category: Shinkai, A.]]
[[Category: Large Structures]]
[[Category: Shiro, Y.]]
[[Category: Agari Y]]
[[Category: Yokoyama, S.]]
[[Category: Ebihara A]]
[[Category: 2-dimethylmenaquinone methyltransferase]]
[[Category: Jeyakanthan J]]
[[Category: Beta]]
[[Category: Kanaujia SP]]
[[Category: Beta alpha domain]]
[[Category: Kuramitsu S]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Rafi ZA]]
[[Category: Nppsfa]]
[[Category: Sekar K]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Shinkai A]]
[[Category: Rsgi]]
[[Category: Shiro Y]]
[[Category: Structural genomic]]
[[Category: Yokoyama S]]
 
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Retrieved from "https://proteopedia.org/2pcn"