3d19: Difference between revisions

From Proteopedia
Jump to navigationJump to search
OCA (talk | contribs)
No edit summary
OCA (talk | contribs)
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3d19.png|left|200px]]


<!--
==Crystal structure of a conserved metalloprotein from Bacillus cereus==
The line below this paragraph, containing "STRUCTURE_3d19", creates the "Structure Box" on the page.
<StructureSection load='3d19' size='340' side='right'caption='[[3d19]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D19 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D19 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
{{STRUCTURE_3d19|  PDB=3d19  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d19 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d19 OCA], [https://pdbe.org/3d19 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d19 RCSB], [https://www.ebi.ac.uk/pdbsum/3d19 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d19 ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/3d19 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a conserved metalloprotein from Bacillus cereus===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
3D19 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacillus_cereus_g9241 Bacillus cereus g9241]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D19 OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d1/3d19_consurf.spt"</scriptWhenChecked>
[[Category: Bacillus cereus g9241]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Almo, S C.]]
  </jmolCheckbox>
[[Category: Bain, K T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d19 ConSurf].
[[Category: Bonanno, J B.]]
<div style="clear:both"></div>
[[Category: Burley, S K.]]
__TOC__
[[Category: Chang, S.]]
</StructureSection>
[[Category: Freeman, J.]]
[[Category: Large Structures]]
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
[[Category: Almo SC]]
[[Category: Ozyurt, S.]]
[[Category: Bain KT]]
[[Category: Patskovsky, Y.]]
[[Category: Bonanno JB]]
[[Category: Sauder, J M.]]
[[Category: Burley SK]]
[[Category: Smith, D.]]
[[Category: Chang S]]
[[Category: Wasserman, S.]]
[[Category: Freeman J]]
[[Category: New york sgx research center for structural genomic]]
[[Category: Ozyurt S]]
[[Category: Nysgxrc]]
[[Category: Patskovsky Y]]
[[Category: Protein structure initiative]]
[[Category: Sauder JM]]
[[Category: Psi-2]]
[[Category: Smith D]]
[[Category: Structural genomic]]
[[Category: Wasserman S]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 00:13:43 2008''