2p5d: Difference between revisions

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{{Seed}}
[[Image:2p5d.png|left|200px]]


<!--
==Crystal structure of MJECL36 from Methanocaldococcus jannaschii DSM 2661==
The line below this paragraph, containing "STRUCTURE_2p5d", creates the "Structure Box" on the page.
<StructureSection load='2p5d' size='340' side='right'caption='[[2p5d]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2p5d]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P5D FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p5d OCA], [https://pdbe.org/2p5d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p5d RCSB], [https://www.ebi.ac.uk/pdbsum/2p5d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p5d ProSAT], [https://www.topsan.org/Proteins/RSGI/2p5d TOPSAN]</span></td></tr>
{{STRUCTURE_2p5d|  PDB=2p5d  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of MJECL36 from Methanocaldococcus jannaschii DSM 2661===
[https://www.uniprot.org/uniprot/Y3536_METJA Y3536_METJA]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2P5D is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P5D OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p5/2p5d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p5d ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Single protein]]
[[Category: Kunishima N]]
[[Category: Kunishima, N.]]
[[Category: Sugahara M]]
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
[[Category: Sugahara, M.]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: National project on protein structural and functional analyse]]
[[Category: Nppsfa]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Rsgi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 01:25:33 2008''

Latest revision as of 08:59, 25 October 2023

Crystal structure of MJECL36 from Methanocaldococcus jannaschii DSM 2661

2p5d, resolution 1.70Å

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