3dxp: Difference between revisions

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{{Seed}}
[[Image:3dxp.png|left|200px]]


<!--
==Crystal structure of a putative aminoglycoside phosphotransferase (reut_a1007) from ralstonia eutropha jmp134 at 2.32 A resolution==
The line below this paragraph, containing "STRUCTURE_3dxp", creates the "Structure Box" on the page.
<StructureSection load='3dxp' size='340' side='right'caption='[[3dxp]], [[Resolution|resolution]] 2.32&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dxp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Cupriavidus_pinatubonensis_JMP134 Cupriavidus pinatubonensis JMP134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DXP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dxp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dxp OCA], [https://pdbe.org/3dxp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dxp RCSB], [https://www.ebi.ac.uk/pdbsum/3dxp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dxp ProSAT], [https://www.topsan.org/Proteins/JCSG/3dxp TOPSAN]</span></td></tr>
{{STRUCTURE_3dxp|  PDB=3dxp  |  SCENE=  }}
</table>
 
== Function ==
===Crystal structure of putative acyl-CoA dehydrogenase (YP_295230.1) from RALSTONIA EUTROPHA JMP134 at 2.32 A resolution===
[https://www.uniprot.org/uniprot/Q473P7_CUPPJ Q473P7_CUPPJ]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
3DXP is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Ralstonia_eutropha_jmp134 Ralstonia eutropha jmp134]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DXP OCA].  
  <jmolCheckbox>
[[Category: Ralstonia eutropha jmp134]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dx/3dxp_consurf.spt"</scriptWhenChecked>
[[Category: Single protein]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Jcsg]]
  </jmolCheckbox>
[[Category: Joint center for structural genomic]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dxp ConSurf].
[[Category: Protein structure initiative]]
<div style="clear:both"></div>
[[Category: Psi-2]]
__TOC__
[[Category: Putative acyl-coa dehydrogenase]]
</StructureSection>
[[Category: Structural genomic]]
[[Category: Cupriavidus pinatubonensis JMP134]]
[[Category: Transferase]]
[[Category: Large Structures]]
[[Category: Unknown function]]
[[Category: Yp_295230 1]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 02:37:25 2008''
Retrieved from "https://proteopedia.org/3dxp"