3cew: Difference between revisions

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{{Seed}}
[[Image:3cew.png|left|200px]]


<!--
==Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205==
The line below this paragraph, containing "STRUCTURE_3cew", creates the "Structure Box" on the page.
<StructureSection load='3cew' size='340' side='right'caption='[[3cew]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3cew]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_fragilis_NCTC_9343 Bacteroides fragilis NCTC 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CEW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CEW FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.31&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3cew|  PDB=3cew  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cew FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cew OCA], [https://pdbe.org/3cew PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cew RCSB], [https://www.ebi.ac.uk/pdbsum/3cew PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cew ProSAT], [https://www.topsan.org/Proteins/NESGC/3cew TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of a cupin protein (BF4112) from Bacteroides fragilis. Northeast Structural Genomics Consortium target BfR205===
== Function ==
 
[https://www.uniprot.org/uniprot/A0A380YRY7_BACFN A0A380YRY7_BACFN]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3CEW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_fragilis_nctc_9343 Bacteroides fragilis nctc 9343]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CEW OCA].  
Check<jmol>
[[Category: Bacteroides fragilis nctc 9343]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ce/3cew_consurf.spt"</scriptWhenChecked>
[[Category: Acton, T B.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Baran, M C.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Chen, Y.]]
  </jmolCheckbox>
[[Category: Ciccosanti, C.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cew ConSurf].
[[Category: Foote, E L.]]
<div style="clear:both"></div>
[[Category: Forouhar, F.]]
__TOC__
[[Category: Hunt, J F.]]
</StructureSection>
[[Category: Maglaqui, M.]]
[[Category: Bacteroides fragilis NCTC 9343]]
[[Category: Mao, L.]]
[[Category: Large Structures]]
[[Category: Montelione, G T.]]
[[Category: Acton TB]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Baran MC]]
[[Category: Seetharaman, J.]]
[[Category: Chen Y]]
[[Category: Tong, L.]]
[[Category: Ciccosanti C]]
[[Category: Wang, H.]]
[[Category: Foote EL]]
[[Category: Xiao, R.]]
[[Category: Forouhar F]]
[[Category: All beta-protein]]
[[Category: Hunt JF]]
[[Category: Nesg]]
[[Category: Maglaqui M]]
[[Category: Northeast structural genomics consortium]]
[[Category: Mao L]]
[[Category: Protein structure initiative]]
[[Category: Montelione GT]]
[[Category: Psi-2]]
[[Category: Seetharaman J]]
[[Category: Structural genomic]]
[[Category: Tong L]]
[[Category: Unknown function]]
[[Category: Wang H]]
 
[[Category: Xiao R]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 03:09:12 2008''
Retrieved from "https://proteopedia.org/3cew"