2r5f: Difference between revisions

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{{Seed}}
[[Image:2r5f.png|left|200px]]


<!--
==Putative sugar-binding domain of transcriptional regulator DeoR from Pseudomonas syringae pv. tomato==
The line below this paragraph, containing "STRUCTURE_2r5f", creates the "Structure Box" on the page.
<StructureSection load='2r5f' size='340' side='right'caption='[[2r5f]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2r5f]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._DC3000 Pseudomonas syringae pv. tomato str. DC3000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R5F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
{{STRUCTURE_2r5f|  PDB=2r5f  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r5f OCA], [https://pdbe.org/2r5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r5f RCSB], [https://www.ebi.ac.uk/pdbsum/2r5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r5f ProSAT], [https://www.topsan.org/Proteins/MCSG/2r5f TOPSAN]</span></td></tr>
 
</table>
===Putative sugar-binding domain of transcriptional regulator DeoR from Pseudomonas syringae pv. tomato===
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
 
Check<jmol>
==About this Structure==
  <jmolCheckbox>
2R5F is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_syringae_pv._tomato_str._dc3000 Pseudomonas syringae pv. tomato str. dc3000]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R5F OCA].  
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r5/2r5f_consurf.spt"</scriptWhenChecked>
[[Category: Pseudomonas syringae pv. tomato str. dc3000]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Single protein]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Clancy, S.]]
  </jmolCheckbox>
[[Category: Cuff, M E.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r5f ConSurf].
[[Category: Duggan, E.]]
<div style="clear:both"></div>
[[Category: Joachimiak, A.]]
__TOC__
[[Category: MCSG, Midwest Center for Structural Genomics.]]
</StructureSection>
[[Category: Mcsg]]
[[Category: Large Structures]]
[[Category: Midwest center for structural genomic]]
[[Category: Pseudomonas syringae pv. tomato str. DC3000]]
[[Category: Pfam04198]]
[[Category: Clancy S]]
[[Category: Protein structure initiative]]
[[Category: Cuff ME]]
[[Category: Psi-2]]
[[Category: Duggan E]]
[[Category: Structural genomic]]
[[Category: Joachimiak A]]
[[Category: Sugar-binding domain]]
[[Category: Transcription regulator]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 03:39:10 2008''
Retrieved from "https://proteopedia.org/2r5f"