3cne: Difference between revisions

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{{Seed}}
[[Image:3cne.png|left|200px]]


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==Crystal structure of the putative protease I from Bacteroides thetaiotaomicron==
The line below this paragraph, containing "STRUCTURE_3cne", creates the "Structure Box" on the page.
<StructureSection load='3cne' size='340' side='right'caption='[[3cne]], [[Resolution|resolution]] 1.99&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3cne]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CNE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CNE FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.99&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3cne|  PDB=3cne  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cne FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cne OCA], [https://pdbe.org/3cne PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cne RCSB], [https://www.ebi.ac.uk/pdbsum/3cne PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cne ProSAT], [https://www.topsan.org/Proteins/MCSG/3cne TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the putative protease I from Bacteroides thetaiotaomicron===
== Function ==
 
[https://www.uniprot.org/uniprot/PPBAT_BACTN PPBAT_BACTN] Binds flavin derivatives, such as lumichrome, riboflavin, FMN, and FAD (PubMed:22718753, PubMed:25263158). May act as a flavin storage protein (PubMed:22718753, PubMed:25263158). Appears to lack proteolytic or chaperone activities (PubMed:25263158).<ref>PMID:22718753</ref> <ref>PMID:25263158</ref>
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3CNE is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CNE OCA].  
Check<jmol>
[[Category: Bacteria]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cn/3cne_consurf.spt"</scriptWhenChecked>
[[Category: Abdullah, J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Volkart, L.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cne ConSurf].
[[Category: Zhang, R.]]
<div style="clear:both"></div>
[[Category: Hydrolase]]
== References ==
[[Category: Mcsg]]
<references/>
[[Category: Midwest center for structural genomic]]
__TOC__
[[Category: Protease i]]
</StructureSection>
[[Category: Protein structure initiative]]
[[Category: Bacteroides thetaiotaomicron VPI-5482]]
[[Category: Psi-2]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Abdullah J]]
 
[[Category: Joachimiak A]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 04:11:02 2008''
[[Category: Volkart L]]
[[Category: Zhang R]]

Latest revision as of 09:45, 6 November 2024

Crystal structure of the putative protease I from Bacteroides thetaiotaomicron

3cne, resolution 1.99Å

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