2p9m: Difference between revisions

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{{Seed}}
[[Image:2p9m.png|left|200px]]


<!--
==Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661==
The line below this paragraph, containing "STRUCTURE_2p9m", creates the "Structure Box" on the page.
<StructureSection load='2p9m' size='340' side='right'caption='[[2p9m]], [[Resolution|resolution]] 2.59&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2p9m]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_DSM_2661 Methanocaldococcus jannaschii DSM 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2P9M FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.59&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2p9m|  PDB=2p9m  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2p9m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2p9m OCA], [https://pdbe.org/2p9m PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2p9m RCSB], [https://www.ebi.ac.uk/pdbsum/2p9m PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2p9m ProSAT], [https://www.topsan.org/Proteins/RSGI/2p9m TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of conserved hypothetical protein MJ0922 from Methanocaldococcus jannaschii DSM 2661===
== Function ==
 
[https://www.uniprot.org/uniprot/Y922_METJA Y922_METJA]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
2P9M is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii_dsm_2661 Methanocaldococcus jannaschii dsm 2661]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2P9M OCA].  
Check<jmol>
[[Category: Methanocaldococcus jannaschii dsm 2661]]
  <jmolCheckbox>
[[Category: Single protein]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/p9/2p9m_consurf.spt"</scriptWhenChecked>
[[Category: Charz, J.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Chen, L.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ebihara, A.]]
  </jmolCheckbox>
[[Category: Fu, Z-Q.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2p9m ConSurf].
[[Category: II, J T.Swindell.]]
<div style="clear:both"></div>
[[Category: Kuramitsu, S.]]
__TOC__
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
</StructureSection>
[[Category: Rose, J P.]]
[[Category: Large Structures]]
[[Category: SECSG, Southeast Collaboratory for Structural Genomics.]]
[[Category: Methanocaldococcus jannaschii DSM 2661]]
[[Category: Shinkai, A.]]
[[Category: Charz J]]
[[Category: Wang, B-C.]]
[[Category: Chen L]]
[[Category: Yokoyama, S.]]
[[Category: Ebihara A]]
[[Category: Zhao, M.]]
[[Category: Fu Z-Q]]
[[Category: Zhu, J.]]
[[Category: Kuramitsu S]]
[[Category: Methanocaldococcus jannaschii]]
[[Category: Rose JP]]
[[Category: Mj0922]]
[[Category: Shinkai A]]
[[Category: Protein structure initiative]]
[[Category: Swindell II JT]]
[[Category: Psi]]
[[Category: Wang B-C]]
[[Category: Riken structural genomics/proteomics initiative]]
[[Category: Yokoyama S]]
[[Category: Rsgi]]
[[Category: Zhao M]]
[[Category: Secsg]]
[[Category: Zhu J]]
[[Category: Southeast collaboratory for structural genomic]]
[[Category: Structural genomic]]
 
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Retrieved from "https://proteopedia.org/2p9m"