1uf3: Difference between revisions

From Proteopedia
Jump to navigationJump to search
← Older edit
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
OCA (talk | contribs)
Bots, Bureaucrats, journal, Administrators
3,332,843 edits
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:1uf3.png|left|200px]]


<!--
==Crystal structure of TT1561 of thermus thermophilus HB8==
The line below this paragraph, containing "STRUCTURE_1uf3", creates the "Structure Box" on the page.
<StructureSection load='1uf3' size='340' side='right'caption='[[1uf3]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1uf3]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UF3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UF3 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_1uf3|  PDB=1uf3  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uf3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uf3 OCA], [https://pdbe.org/1uf3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uf3 RCSB], [https://www.ebi.ac.uk/pdbsum/1uf3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uf3 ProSAT], [https://www.topsan.org/Proteins/RSGI/1uf3 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of TT1561 of thermus thermophilus HB8===
== Function ==
 
[https://www.uniprot.org/uniprot/P84068_THETH P84068_THETH]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UF3 OCA].  
Check<jmol>
[[Category: Kato-Murayama, M.]]
  <jmolCheckbox>
[[Category: Kuramitsu, S.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uf/1uf3_consurf.spt"</scriptWhenChecked>
[[Category: Murayama, K.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Shirouzu, M.]]
  </jmolCheckbox>
[[Category: Terada, T.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uf3 ConSurf].
[[Category: Yokoyama, S.]]
<div style="clear:both"></div>
[[Category: Metallo-dependent phosphatase]]
__TOC__
[[Category: Riken structural genomics/proteomics initiative]]
</StructureSection>
[[Category: Rsgi]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
 
[[Category: Kato-Murayama M]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Sep 29 06:07:13 2008''
[[Category: Kuramitsu S]]
[[Category: Murayama K]]
[[Category: Shirouzu M]]
[[Category: Terada T]]
[[Category: Yokoyama S]]
Retrieved from "https://proteopedia.org/1uf3"