1su1: Difference between revisions

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New page: left|200px<br /><applet load="1su1" size="450" color="white" frame="true" align="right" spinBox="true" caption="1su1, resolution 2.25Å" /> '''Structural and bioch...
 
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[[Image:1su1.jpg|left|200px]]<br /><applet load="1su1" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1su1, resolution 2.25&Aring;" />
'''Structural and biochemical characterization of Yfce, a phosphoesterase from E. coli'''<br />


==About this Structure==
==Structural and biochemical characterization of Yfce, a phosphoesterase from E. coli==
1SU1 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with ZN and SO4 as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1SU1 OCA].  
<StructureSection load='1su1' size='340' side='right'caption='[[1su1]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1su1]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SU1 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SU1 FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1su1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1su1 OCA], [https://pdbe.org/1su1 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1su1 RCSB], [https://www.ebi.ac.uk/pdbsum/1su1 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1su1 ProSAT], [https://www.topsan.org/Proteins/MCSG/1su1 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YFCE_ECOLI YFCE_ECOLI] Shows phosphodiesterase activity, hydrolyzing phosphodiesters bonds in the artificial chromogenic substrates bis-p-nitrophenyl phosphate (bis-pNPP), and less efficiently thymidine 5'-monophosphate p-nitrophenyl ester (pNP-TMP) and p-nitrophenylphosphorylcholine (pNPPC). The physiological substrate is unknown.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/su/1su1_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1su1 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Anderson, W.F.]]
[[Category: Anderson WF]]
[[Category: Evdokimova, E.]]
[[Category: Evdokimova E]]
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
[[Category: Miller DJ]]
[[Category: Miller, D.J.]]
[[Category: Savchenko A]]
[[Category: Savchenko, A.]]
[[Category: Shuvalova L]]
[[Category: Shuvalova, L.]]
[[Category: Yakunin A]]
[[Category: Yakunin, A.]]
[[Category: SO4]]
[[Category: ZN]]
[[Category: mcsg]]
[[Category: midwest center for structural genomics]]
[[Category: phosphoesterase]]
[[Category: protein structure initiative]]
[[Category: psi]]
[[Category: structural genomics]]
[[Category: yfce]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 02:40:02 2007''
Retrieved from "https://proteopedia.org/1su1"