1tgy: Difference between revisions

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New page: left|200px<br /><applet load="1tgy" size="450" color="white" frame="true" align="right" spinBox="true" caption="1tgy, resolution 2.20Å" /> '''Structure of E. coli...
 
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[[Image:1tgy.gif|left|200px]]<br /><applet load="1tgy" size="450" color="white" frame="true" align="right" spinBox="true"
caption="1tgy, resolution 2.20&Aring;" />
'''Structure of E. coli Uridine Phosphorylase complexed with uracil and ribose 1-phosphate'''<br />


==About this Structure==
==Structure of E. coli Uridine Phosphorylase complexed with uracil and ribose 1-phosphate==
1TGY is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli] with R1P, K and URA as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Uridine_phosphorylase Uridine phosphorylase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.4.2.3 2.4.2.3] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1TGY OCA].  
<StructureSection load='1tgy' size='340' side='right'caption='[[1tgy]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
== Structural highlights ==
<table><tr><td colspan='2'>[[1tgy]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TGY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TGY FirstGlance]. <br>
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=R1P:RIBOSE-1-PHOSPHATE'>R1P</scene>, <scene name='pdbligand=URA:URACIL'>URA</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1tgy FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1tgy OCA], [https://pdbe.org/1tgy PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1tgy RCSB], [https://www.ebi.ac.uk/pdbsum/1tgy PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1tgy ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/UDP_ECOLI UDP_ECOLI] Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tg/1tgy_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1tgy ConSurf].
<div style="clear:both"></div>
 
==See Also==
*[[Uridine phosphorylase 3D structures|Uridine phosphorylase 3D structures]]
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Uridine phosphorylase]]
[[Category: Begley TP]]
[[Category: Begley, T.P.]]
[[Category: Bu W]]
[[Category: Bu, W.]]
[[Category: Ealick SE]]
[[Category: Ealick, S.E.]]
[[Category: Sanders JM]]
[[Category: Sanders, J.M.]]
[[Category: Settembre EC]]
[[Category: Settembre, E.C.]]
[[Category: K]]
[[Category: R1P]]
[[Category: URA]]
[[Category: pyrimidine nucleoside phosphorylase]]
[[Category: uridine]]
[[Category: uridine phosphorylase]]
[[Category: uridine salvage]]
 
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 03:15:20 2007''
Retrieved from "https://proteopedia.org/1tgy"