2zqm: Difference between revisions

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{{Seed}}
[[Image:2zqm.png|left|200px]]


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==Crystal structure of the prefoldin beta subunit from Thermococcus strain KS-1==
The line below this paragraph, containing "STRUCTURE_2zqm", creates the "Structure Box" on the page.
<StructureSection load='2zqm' size='340' side='right'caption='[[2zqm]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2zqm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermococcus_sp._JCM_11816 Thermococcus sp. JCM 11816]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZQM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZQM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
{{STRUCTURE_2zqm|  PDB=2zqm  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zqm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zqm OCA], [https://pdbe.org/2zqm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zqm RCSB], [https://www.ebi.ac.uk/pdbsum/2zqm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zqm ProSAT]</span></td></tr>
 
</table>
===Crystal structure of the prefoldin beta subunit from Thermococcus strain KS-1===
== Function ==
 
[https://www.uniprot.org/uniprot/B0I3E0_THEK1 B0I3E0_THEK1] Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding (By similarity).[HAMAP-Rule:MF_00307]
 
== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
The line below this paragraph, {{ABSTRACT_PUBMED_18775436}}, adds the Publication Abstract to the page
Check<jmol>
(as it appears on PubMed at http://www.pubmed.gov), where 18775436 is the PubMed ID number.
  <jmolCheckbox>
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    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zq/2zqm_consurf.spt"</scriptWhenChecked>
{{ABSTRACT_PUBMED_18775436}}
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
==About this Structure==
  </jmolCheckbox>
2ZQM is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Thermococcus_sp. Thermococcus sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZQM OCA].  
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zqm ConSurf].
 
<div style="clear:both"></div>
==Reference==
__TOC__
Structural and molecular characterization of the prefoldin beta subunit from Thermococcus strain KS-1., Kida H, Sugano Y, Iizuka R, Fujihashi M, Yohda M, Miki K, J Mol Biol. 2008 Nov 14;383(3):465-74. Epub 2008 Aug 23. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18775436 18775436]
</StructureSection>
[[Category: Single protein]]
[[Category: Large Structures]]
[[Category: Thermococcus sp.]]
[[Category: Thermococcus sp. JCM 11816]]
[[Category: Kida, H.]]
[[Category: Kida H]]
[[Category: Miki, K.]]
[[Category: Miki K]]
[[Category: Chaperone]]
[[Category: Prefoldin]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 29 09:48:20 2008''

Latest revision as of 13:58, 13 March 2024

Crystal structure of the prefoldin beta subunit from Thermococcus strain KS-1

2zqm, resolution 1.90Å

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