1vl8: Difference between revisions

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{{Seed}}
[[Image:1vl8.png|left|200px]]


<!--
==Crystal structure of Gluconate 5-dehydrogenase (TM0441) from Thermotoga maritima at 2.07 A resolution==
The line below this paragraph, containing "STRUCTURE_1vl8", creates the "Structure Box" on the page.
<StructureSection load='1vl8' size='340' side='right'caption='[[1vl8]], [[Resolution|resolution]] 2.07&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[1vl8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima_MSB8 Thermotoga maritima MSB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VL8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VL8 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.07&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
{{STRUCTURE_1vl8|  PDB=1vl8  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vl8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vl8 OCA], [https://pdbe.org/1vl8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vl8 RCSB], [https://www.ebi.ac.uk/pdbsum/1vl8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vl8 ProSAT], [https://www.topsan.org/Proteins/JCSG/1vl8 TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of Gluconate 5-dehydrogenase (TM0441) from Thermotoga maritima at 2.07 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/Q9WYS2_THEMA Q9WYS2_THEMA]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
1VL8 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Thermotoga_maritima_msb8 Thermotoga maritima msb8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VL8 OCA].  
Check<jmol>
[[Category: Gluconate 5-dehydrogenase]]
  <jmolCheckbox>
[[Category: Thermotoga maritima msb8]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vl/1vl8_consurf.spt"</scriptWhenChecked>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Gluconate 5-dehydrogenase]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Jcsg]]
  </jmolCheckbox>
[[Category: Joint center for structural genomic]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vl8 ConSurf].
[[Category: Protein structure initiative]]
<div style="clear:both"></div>
[[Category: Psi]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
[[Category: Tm0441]]
[[Category: Large Structures]]
 
[[Category: Thermotoga maritima MSB8]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 09:56:19 2008''
Retrieved from "https://proteopedia.org/1vl8"