2i5u: Difference between revisions

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{{Seed}}
[[Image:2i5u.png|left|200px]]


<!--
==Crystal structure of DnaD domain protein from Enterococcus faecalis. Structural genomics target APC85179==
The line below this paragraph, containing "STRUCTURE_2i5u", creates the "Structure Box" on the page.
<StructureSection load='2i5u' size='340' side='right'caption='[[2i5u]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2i5u]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Entfa Entfa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I5U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I5U FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-->
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_2i5u|  PDB=2i5u  |  SCENE=  }}
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">DnaD ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=226185 ENTFA])</td></tr>
 
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i5u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i5u OCA], [https://pdbe.org/2i5u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i5u RCSB], [https://www.ebi.ac.uk/pdbsum/2i5u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i5u ProSAT], [https://www.topsan.org/Proteins/MCSG/2i5u TOPSAN]</span></td></tr>
===Crystal structure of DnaD domain protein from Enterococcus faecalis. Structural genomics target APC85179===
</table>
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
2I5U is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecalis Enterococcus faecalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I5U OCA].  
  <jmolCheckbox>
[[Category: Enterococcus faecalis]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/2i5u_consurf.spt"</scriptWhenChecked>
[[Category: Bargassa, M.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Joachimiak, A.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Wu, R.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i5u ConSurf].
[[Category: Zhang, R.]]
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Entfa]]
[[Category: Large Structures]]
[[Category: Bargassa, M]]
[[Category: Joachimiak, A]]
[[Category: Structural genomic]]
[[Category: Wu, R]]
[[Category: Zhang, R]]
[[Category: Dnad domain protein]]
[[Category: Dnad domain protein]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Unknown function]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:01:02 2008''
Retrieved from "https://proteopedia.org/2i5u"