3dsm: Difference between revisions

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{{Seed}}
[[Image:3dsm.png|left|200px]]


<!--
==Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.==
The line below this paragraph, containing "STRUCTURE_3dsm", creates the "Structure Box" on the page.
<StructureSection load='3dsm' size='340' side='right'caption='[[3dsm]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3dsm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_uniformis_ATCC_8492 Bacteroides uniformis ATCC 8492]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DSM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3dsm|  PDB=3dsm  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3dsm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3dsm OCA], [https://pdbe.org/3dsm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3dsm RCSB], [https://www.ebi.ac.uk/pdbsum/3dsm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3dsm ProSAT], [https://www.topsan.org/Proteins/NESGC/3dsm TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.===
== Function ==
 
[https://www.uniprot.org/uniprot/A7V5N4_BACUC A7V5N4_BACUC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3DSM is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_uniformis_atcc_8492 Bacteroides uniformis atcc 8492]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DSM OCA].  
Check<jmol>
[[Category: Bacteroides uniformis atcc 8492]]
  <jmolCheckbox>
[[Category: Acton, T B.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ds/3dsm_consurf.spt"</scriptWhenChecked>
[[Category: Ciccosanti, C.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Everett, J K]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Foote, E L.]]
  </jmolCheckbox>
[[Category: Forouhar, F.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3dsm ConSurf].
[[Category: Hunt, J F.]]
<div style="clear:both"></div>
[[Category: Janjua, H.]]
__TOC__
[[Category: Lew, S.]]
</StructureSection>
[[Category: Maglaqui, M.]]
[[Category: Bacteroides uniformis ATCC 8492]]
[[Category: Mao, L.]]
[[Category: Large Structures]]
[[Category: Montelione, G T.]]
[[Category: Acton TB]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Ciccosanti C]]
[[Category: Seetharaman, J.]]
[[Category: Everett JK]]
[[Category: Tong, L.]]
[[Category: Foote EL]]
[[Category: Xiao, R.]]
[[Category: Forouhar F]]
[[Category: Nesg]]
[[Category: Hunt JF]]
[[Category: Northeast structural genomics consortium]]
[[Category: Janjua H]]
[[Category: Protein structure initiative]]
[[Category: Lew S]]
[[Category: Psi-2]]
[[Category: Maglaqui M]]
[[Category: Seven_blated beta propeller]]
[[Category: Mao L]]
[[Category: Structural genomic]]
[[Category: Montelione GT]]
[[Category: Unknown function]]
[[Category: Seetharaman J]]
 
[[Category: Tong L]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:41:19 2008''
[[Category: Xiao R]]

Latest revision as of 07:55, 9 October 2024

Crystal structure of the surface layer protein BACUNI_02894 from Bacteroides uniformis, Northeast Structural Genomics Consortium Target BtR193D.

3dsm, resolution 1.90Å

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