3d3r: Difference between revisions

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{{Seed}}
[[Image:3d3r.png|left|200px]]


<!--
==Crystal structure of the hydrogenase assembly chaperone HypC/HupF family protein from Shewanella oneidensis MR-1==
The line below this paragraph, containing "STRUCTURE_3d3r", creates the "Structure Box" on the page.
<StructureSection load='3d3r' size='340' side='right'caption='[[3d3r]], [[Resolution|resolution]] 1.85&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3d3r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shewanella_oneidensis_MR-1 Shewanella oneidensis MR-1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D3R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3D3R FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.85&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3d3r|  PDB=3d3r  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3d3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3d3r OCA], [https://pdbe.org/3d3r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3d3r RCSB], [https://www.ebi.ac.uk/pdbsum/3d3r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3d3r ProSAT], [https://www.topsan.org/Proteins/MCSG/3d3r TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of the hydrogenase assembly chaperone HypC/HupF family protein from Shewanella oneidensis MR-1===
== Function ==
 
[https://www.uniprot.org/uniprot/Q8EF93_SHEON Q8EF93_SHEON]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3D3R is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Bacteria Bacteria]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3D3R OCA].  
Check<jmol>
[[Category: Bacteria]]
  <jmolCheckbox>
[[Category: Edwards, A M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/d3/3d3r_consurf.spt"</scriptWhenChecked>
[[Category: Joachimiak, A.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Kim, Y.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: MCSG, Midwest Center for Structural Genomics.]]
  </jmolCheckbox>
[[Category: Onopriyenko, O.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3d3r ConSurf].
[[Category: Savchenko, A.]]
<div style="clear:both"></div>
[[Category: Skarina, T.]]
__TOC__
[[Category: Chaperone]]
</StructureSection>
[[Category: Mcsg]]
[[Category: Large Structures]]
[[Category: Midwest center for structural genomic]]
[[Category: Shewanella oneidensis MR-1]]
[[Category: Protein structure initiative]]
[[Category: Edwards AM]]
[[Category: Psi-2]]
[[Category: Joachimiak A]]
[[Category: Small beta-barrel]]
[[Category: Kim Y]]
[[Category: Structural genomic]]
[[Category: Onopriyenko O]]
 
[[Category: Savchenko A]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 11:47:32 2008''
[[Category: Skarina T]]

Latest revision as of 08:56, 30 October 2024

Crystal structure of the hydrogenase assembly chaperone HypC/HupF family protein from Shewanella oneidensis MR-1

3d3r, resolution 1.85Å

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