3ddj: Difference between revisions

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{{Seed}}
[[Image:3ddj.png|left|200px]]


<!--
==Crystal structure of a cbs domain-containing protein in complex with amp (sso3205) from sulfolobus solfataricus at 1.80 A resolution==
The line below this paragraph, containing "STRUCTURE_3ddj", creates the "Structure Box" on the page.
<StructureSection load='3ddj' size='340' side='right'caption='[[3ddj]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ddj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharolobus_solfataricus Saccharolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DDJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3DDJ FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AMP:ADENOSINE+MONOPHOSPHATE'>AMP</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene></td></tr>
{{STRUCTURE_3ddj|  PDB=3ddj  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ddj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ddj OCA], [https://pdbe.org/3ddj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ddj RCSB], [https://www.ebi.ac.uk/pdbsum/3ddj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ddj ProSAT], [https://www.topsan.org/Proteins/JCSG/3ddj TOPSAN]</span></td></tr>
 
</table>
===Crystal structure of CBS domain-containing protein in complex with AMP (NP_344512.1) from SULFOLOBUS SOLFATARICUS at 1.80 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/Q97U20_SACS2 Q97U20_SACS2]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3DDJ is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3DDJ OCA].  
Check<jmol>
[[Category: Sulfolobus solfataricus]]
  <jmolCheckbox>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/3ddj_consurf.spt"</scriptWhenChecked>
[[Category: Cbs domain]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Cbs domain pair]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Cbs domain-containing protein in complex with amp]]
  </jmolCheckbox>
[[Category: Jcsg]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ddj ConSurf].
[[Category: Joint center for structural genomic]]
<div style="clear:both"></div>
[[Category: Np_344512 1]]
__TOC__
[[Category: Protein structure initiative]]
</StructureSection>
[[Category: Psi-2]]
[[Category: Large Structures]]
[[Category: Structural genomic]]
[[Category: Saccharolobus solfataricus]]
[[Category: Unknown function]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sun Nov 16 14:10:31 2008''
Retrieved from "https://proteopedia.org/3ddj"